Pierre-François Lenne
@pflenne.bsky.social
920 followers 220 following 43 posts
Biophysicist interested in cell dynamics and tissue morphogenesis at IBDM and Turing Center for Living Systems Group: https://www.morphotiss.org/ https://www.ibdm.univ-mrs.fr/physical-approaches-to-cell-dynamics/ https://centuri-livingsystems.org
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pflenne.bsky.social
Our code for force inference in epithelial tissues is available online!
Feel free to contact us if you're interested in using it or if you want to collaborate.
Code :Ref :

nature.com/articles/s4159… data.mendeley.com/datasets/78ng4…
Reposted by Pierre-François Lenne
raphclement.bsky.social
Mechanosensation and fast reorientation of ciliary structures: Marvin's work on the surprising locomotion capabilities of Trichoplax, an animal without neurons!
www.biorxiv.org/content/10.1...
pflenne.bsky.social
Katia took the initiative to start a Xenopus project in the lab a few years ago —and now her work is highlighted by Development! Huge congrats, Katia!
dev-journal.bsky.social
Explant elongation initiates in the epithelium

A Research Highlight showcasing new work from @katiabarrett.bsky.social, Shalabh Anand, Virginie Thome, Laurent Kodjabachian, @merkellab.bsky.social, @pflenne.bsky.social

journals.biologists.com/dev/article/...
Fig. 2. Elongation behaviors of isolated and recombined explants in different conditions. (A) Table of isolation and recombined tissue experiments. Tissues are isolated with Activin or not and tested for elongation in isolation or recombined. This yields a total of eight conditions. (B-C′) Isolated mesenchyme and epithelial tissue experiments and their respective aspect ratio plots. N=5. (D-G′) Recombination experiments and their respective plots. Data are mean±s.d. N=5 for all conditions. Scale bars: 100 µm
Reposted by Pierre-François Lenne
alicegros.bsky.social
Feat. @guignardlab.bsky.social @pflenne.bsky.social @shamtlili.bsky.social @philipperoudot.bsky.social
The Tapenade pipeline is fully open-source with user-friendly notebooks and Napari plugins: github.com/GuignardLab/... 🫒
Reposted by Pierre-François Lenne
ibdm.bsky.social
🥇Sham Tlili has been awarded the CNRS 2025 Bronze Medal! She studies how physical forces shape living tissues by using mouse stem cell models known as gastruloids. A unique blend of physics & biology.

🔗 Read more: www.ibdm.univ-amu.fr/sham-tlili-w...
Sham Tlili, winner of the CNRS 2025 bronze medal - IBDM | Institut de Biologie du Développement de Marseille
A distinction that rewards a promising and already fruitful scientific career.
www.ibdm.univ-amu.fr
pflenne.bsky.social
Excited to share that IBDM (Institut de Biologie du Développement de Marseille) is expanding its research groups this year! A great place for developmental biology and interdisciplinary research located on the beautiful Marseille-Luminy campus!
Deadline for applications: March 30th, 2025
pflenne.bsky.social
Congrats on this beautiful work!
pflenne.bsky.social
Thrilled that our team clinched both 1st and 2nd place in the image contest! 🥇🥈 Huge applause for everyone’s creativity and excitement in front of the microscope. Let’s keep inspiring each other! 💪✨ #Teamwork #Science
france-bioimaging.bsky.social
Discover the winners of the FBI Image Contest 2024🔬

🥇Place: Vanessa Weichselberger (IBDM-Université Aix-Marseille)
🥈Place: Dalia El Arawi (IBDM)
🥉Place: Frédéric Fercoq (Musée National d'Histoire Naturelle-Unité MCAM)

🏆 Congratulations to them!
👏 A big thank you to all the participants!
pflenne.bsky.social
Vikas Trivedi's @LabTrivedi @EMBLBarcelona @the_prbb and my group @Equipe_lenne @IBDMmarseille @centuri_ls are recruiting for a Postdoc project on the emergence of mechano-genetic patterns using embryonic organoids!
Start Date: Feb 2023 or later
Informal inquiries are welcome!
pflenne.bsky.social
How do cell-cell contacts remodel in vivo? We address this question here:

biorxiv.org/content/10.110…
Two-point optical manipulation reveals mechanosensitive remodeling of cell-cell contacts in vivo
Biological tissues acquire reproducible shapes during development through dynamic cell behaviors. These events involve the remodeling of cell contacts driven by active cytoskeletal contractile forces. However how cell-cell contacts remodel remains poorly understood because of lack of tools to directly apply forces at cell-cell contacts to produce their remodeling. Here we develop a dual-optical trap manipulation method to impose different force patterns on cell-cell contacts in the early epithelium of the Drosophila embryo. Through different push and pull manipulations at the edges of junctions, the technique allows us to produce junction extension and junction shrinkage. We use these observations to constrain and specify vertex-based models of tissue mechanics, incorporating negative and positive mechanosensitive feedback depending on the type of remodeling. We show that Myosin-II activity responds to junction strain rate and facilitates full junction shrinkage. Altogether our work provides insight into how stress produces efficient deformation of cell-cell contacts in vivo and identifies unanticipated mechanosensitive features of their remodeling. Significance statement The highly organized tissues and organs that form our body emerge from internal dynamic activities at the cellular level. Among such activities, cell shape changes and cell rearrangement, cell extrusion and cell division sculpt epithelial tissues into elongated sheets, tubes and spherical cavities. Remodeling of cell-cell contacts, powered by actomyosin contractility, is key to all these transformations. Although much is known about the molecular machinery and biochemical signals that regulate remodeling of cell contacts, there is a lack of approaches to directly probe the mechanics of cell contacts and therefore assess their ability to resist or deform in response to mechanical loads. We developed an experimental technique to manipulate and exert contractile and extensile forces to cell-cell junctions. Our results lead to a specific physical model of junctional mechanics, with implications in the modeling of collective cell behavior in epithelial tissues. ### Competing Interest Statement The authors have declared no competing interest.
www.biorxiv.org
pflenne.bsky.social
The Munro (Chicago), Lenne and Rupprecht (Marseille) groups seek 2-3 postdoctoral fellows to join a newly funded (NSF/ANR) international collaboration on the multiscale dynamics of cell contact formation and remodeling.
pflenne.bsky.social
Our code for force inference in epithelial tissues is available online!
Feel free to contact us if you're interested in using it or if you want to collaborate.
Code :Ref :

nature.com/articles/s4159… data.mendeley.com/datasets/78ng4…
pflenne.bsky.social
Very happy to welcome in our group Alice Gros @_AliceGros as a new Centuri @centuri_ls PhD student on a joint project with Léo Guignard @GuignardLab on morphogenesis of self-organized multicellular systems #Gastruloids
pflenne.bsky.social
Very fortunate to welcome today a new postdoc in the group, Valentin Dunsing @DunsingValentin, who will explore/exploit "fluctuations" in morphogenesis.
pflenne.bsky.social
Check our latest manuscript on the nanoscopic segregation of polarity proteins in epithelia using superresolution. A project led by @PierreMangeol and a great collaboration with Le Bivic team.

biorxiv.org/content/10.110…
Super-resolution imaging uncovers the nanoscopic segregation of polarity proteins in epithelia
Epithelial tissues acquire their integrity and function through the apico-basal polarization of their constituent cells. Proteins of the PAR and Crumbs complexes are pivotal to epithelial polarization, but the mechanistic understanding of polarization is challenging to reach, largely because numerous potential interactions between these proteins and others have been found, without clear hierarchy in importance. We identify the regionalized and segregated organization of members of the PAR and Crumbs complexes at epithelial apical junctions by imaging endogenous proteins using STED microscopy on Caco-2 cells, human and murine intestinal samples. Proteins organize in submicrometric clusters, with PAR3 overlapping with the tight junction (TJ) while PALS1-PATJ and aPKC-PAR6β form segregated clusters that are apical of the TJ and present in an alternated pattern related to actin organization. CRB3A is also apical of the TJ and weakly overlaps with other polarity proteins. This organization at the nanoscale level significantly simplifies our view on how polarity proteins could cooperate to drive and maintain cell polarity. ### Competing Interest Statement The authors have declared no competing interest.
www.biorxiv.org
pflenne.bsky.social
Honoured and thrilled to become a EMBO member! A big thank you to all the great members of my team, past and present, and to my inspiring colleagues.
pflenne.bsky.social
Signez la pétition : La recherche scientifique a besoin d’un plan d’urgencevia @ChangeFrance

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pflenne.bsky.social
We seek to attract new PIs, computer scientists, physicists, or mathematicians with a theoretical and/or computational biology project, in the Turing Center for Living Systems (CenTuri) in Marseille.

View the offer here


centuri-livingsystems.org/wp-content/upl…
pflenne.bsky.social
Check our latest manuscript on supramolecular architecture of epithelia:

biorxiv.org/content/10.110…