Zamin Iqbal
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zaminiqbal.bsky.social
Zamin Iqbal
@zaminiqbal.bsky.social
Professor of Algorithmic and Microbial Genomics at the University of Bath (UK). Pangenomes, drug resistance (esp TB), data structures for DNA search, plasmid evolution, global microbial surveillance. Open Data, reproducibility
Yes, there next week! Will drop you a line! Somehow thought you had moved
November 24, 2025 at 11:07 PM
sorry to miss this!
November 24, 2025 at 1:01 PM
Omg
November 24, 2025 at 8:56 AM
Congrats on both scores Fernando!
November 23, 2025 at 7:22 PM
Happy birthday 🎂 🥳
November 22, 2025 at 2:43 PM
Welcome!
November 21, 2025 at 3:31 PM
Congrats @taliamycota.bsky.social @hernanaburbano.bsky.social ! Going travelling tomorrow and will def read this, v interesting!
November 21, 2025 at 1:13 AM
Reposted by Zamin Iqbal
This work touches on many things. It shows within-cell evolution constrains which genes will spread on high-copy plasmids. It also gives a strong hint of the origins of highly-abundant “cryptic” plasmids, showing that multicopy plasmids have strong incentives to lose genes. 13/
November 20, 2025 at 9:42 PM
Reposted by Zamin Iqbal
Now that we understood neutral dynamics, we turned to competition. What could cause one plasmid to replicate better than another? Our first thought was transcription might interfere with replication, and it turns out there was a much larger tradeoff than we expected! 7/
November 20, 2025 at 9:42 PM
Reposted by Zamin Iqbal
With this working, as a first test we took two plasmids, identical save for 8 point mutations changing the color, and competed them against one another. Here’s a video of what it looked like when we activated the recombinase. You can see the two compete in real time: 4/
November 20, 2025 at 9:42 PM
Reposted by Zamin Iqbal
How the genes plasmids carry affect their hosts has been well studied, but this smaller scale of evolution has proven much tougher despite decades of theory. Plasmids are small and replication is fast and hard to measure. 2/
November 20, 2025 at 9:42 PM
This is fantastic, many congratulations!
November 20, 2025 at 8:40 PM
Reposted by Zamin Iqbal
The data was collected by the CABBAGE project, which has just been preprinted too: www.biorxiv.org/content/10.1...
www.biorxiv.org
November 19, 2025 at 12:27 PM