Dylan Webster
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dylanwebster.bsky.social
Dylan Webster
@dylanwebster.bsky.social
240 followers 84 following 28 posts
Software product at 10x Genomics. 🧬⚾🥋🎸
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Awesome to see the power of the @10xgenomics.bsky.social Cloud Analysis (10xgenomics.com/cloud) back end come together with the accessibility of LLMs. Shout out to Evan Winget and Hayder Casey and our partners at @anthropic.com for making it happen.

#singlecell #bioinformatics #ai #genomics
What if you could simply ask your analysis tools for answers? We’re collaborating with Anthropic to make that happen, working to turn #singlecell & #spatial analysis into a natural conversation, not a coding lesson. Learn more > https://bit.ly/4nkyURZ
Check out what's next for 10x Genomics across #singlecell, #spatialbiology, and software!
Register now for our AGBT livestream on Feb. 23 where you’ll get an exclusive look at the 10x Genomics Roadmap and all our latest and greatest technology. It’s a once in a livestream opportunity! bit.ly/4gB5z2g
#singlecell has come a long way. But we're also just getting started!
Creating the largest #singlecell dataset ever will take dedication, collaboration & high-performance tools. We’re thrilled the @chanzuckerberg.bsky.social Billion Cells Project will pair GEM-X tech with Ultima Genomics sequencing to achieve this landmark scale. Learn more: bit.ly/4aRaScr
👀 Spotted in the wild! The official 10x Genomics account has landed on Bluesky.
🐦 We’re spreading our wings to join Bluesky and its brilliant community of scientists! ✨ We’re excited to join the scientific conversations on this new platform and connect with you. Who else is here?! 👋
Reposted by Dylan Webster
Want to help build software that enables researchers to answer biology’s hardest and most elusive questions? Do so as Senior Product Manager, Cloud Visualization Software at
10x Genomics!

boards.greenhouse.io/10xgenomics/...

#singlecell #spatialbiology #hiring #productmanagement #TechJobs
Kudos to the Xenium Explorer team at 10x Genomics for consistently upleveling what's possible out of the box for Xenium analysis!

Check out our analysis page to see all Xenium analysis improvements! bit.ly/4flCNSu

#spatialbiology #insitu #singlecellspatial #bioinformatics
Want to help build software that enables researchers to answer biology’s hardest and most elusive questions? Do so as Senior Product Manager, Cloud Visualization Software at
10x Genomics!

boards.greenhouse.io/10xgenomics/...

#singlecell #spatialbiology #hiring #productmanagement #TechJobs
Reposted by Dylan Webster
Emilie Schario says today's data tooling and LLMs make it so everyone can be a "data hire" 📊
Really good blog post!

"... [T]he answer isn’t SQL expertise; it’s curiosity... Remember, a data hire isn't just a job title; it's a mindset."

mixpanel.com/blog/emilie-...
Emilie Schario on making all your hires a ‘data hire’ | Signals & Stories
Insights for digital builders
mixpanel.com
Wow!
Delighted to share new work from our lab:
MultiPerturb-seq 🎛️ ❌ ↕️

Over the last few years, we've been combining CRISPR screens with multimodal readouts of gene expression (RNA) and chromatin accessibility (DNA). In this study, we bring those together within the same cells.
Pooled CRISPR screens with joint single-nucleus chromatin accessibility and transcriptome profiling go.nature.com/4hXER5O
Reposted by Dylan Webster
Check out our updated scatterbar package for visualizing proportional data across spatial coordinates like deconvolved cell types in #spatialtranscriptomics using stacked bar plots (alternative to scatterpies)!

Preprint: www.biorxiv.org/content/10.1...
Code: github.com/JEFworks-Lab...

#dataviz
And now you can try the automated cell annotation directly in Cell Ranger 9!

www.10xgenomics.com/support/soft...

#singlecell #bioinformatics #genomics

Super excited about this cell typing collab between 10x Genomics and the Broad. broad.io/CAS-News

Try it for free on cloud.10xgenomics.com/cloud-analysis and look out for more in the next Cell Ranger release coming imminently ;) (Let us know what you think!)

#singlecell #bioinformatics #genomics
Did you know that 10x Genomics publishes intros, tutorials, and blogs that help navigate the journey to publish #SingleCell, Visium #SpatialTranscriptomics and Xenium #singlecellspatial data? Check out the Analysis Guides!

www.10xgenomics.com/resources/an...

#Genomics #Bioinformatics
You can also check out the public datasets that show this plexy: www.10xgenomics.com/resources/da...
There are 18,536 genes in the human probe set and 20,551 in the mouse probe set.
This page also documents the Human Immune Cell Profiling Panel Antibody List for simultaneous readout of 35 proteins on Visium: www.10xgenomics.com/support/spat...
Hi Albert, this document has an overview of both the poly(A) capture approach for FF and the probe based approach for FFPE: www.10xgenomics.com/resources/do...

This page has detailed documentation of the FFPE probe sets (click through to the individual pages: www.10xgenomics.com/support/spat...
And check out how the redesigned Loupe user interface makes it simple to visualize the expression of your favorite genes!
The feature I’m most excited about: Finding target genes in your experiment just got easier with the new multi-sample differential expression in Loupe 7
Want to analyze Seurat data without code? Use the new 10x Genomics LoupeR package to move your data into the new Loupe 7. It sports a redesigned UI, and includes new features that put publication-ready figures just a few clicks away!

#genomics #singlecell
Finally, review the recommendations for optimal assay performance. Either accept the recommendations or iterate as needed. At the end of the workflow, your panel is ready to be ordered and manufactured. Check it out for yourself!
cloud.10xgenomics.com/xenium-panel...