Pfliegler Lab at University of Debrecen
pflieglerlab.bsky.social
Pfliegler Lab at University of Debrecen
@pflieglerlab.bsky.social
Saccharomyces, yeasts, mycobiome, phylogenomics
We welcome @ola-gorzynska.bsky.social from Wroclaw Medical University in Debrecen! Ola will spend a month in our lab working on clinical #Saccharomyces yeast genomes. 54 Polish isolates' sequences just arrived, so the project starts w/ Andi Harmath and @balintnemeth.bsky.social ! Good luck, Ola!
January 23, 2026 at 6:32 AM
Reposted by Pfliegler Lab at University of Debrecen
1/🧵
Major milestone unlocked for mycology! 🍄

We just published a massive genomic resource in 𝐒𝐜𝐢𝐞𝐧𝐭𝐢𝐟𝐢𝐜 𝐃𝐚𝐭𝐚, releasing 2,695 complete circular mitochondrial species assembled from public data

This single dataset nearly 𝐓𝐑𝐈𝐏𝐋𝐄𝐒 📈the known mitochondrial diversity of the Kingdom Fungi
rdcu.be/eYZ2h
January 15, 2026 at 2:31 PM
Reposted by Pfliegler Lab at University of Debrecen
New paper! Here we present the history, geographical distribution, and structure of organizations in #mycology across #Europe, as well as their activities—including journals, magazines, meetings, educational initiatives, and #citizenscience projects. doi.org/10.1007/s105... #FunDive
January 12, 2026 at 11:52 AM
My first ever hairy tofu, 毛豆腐. Made with a Mucor species starter culture I ordered from Ebay. After 24 hours it was ready and I stir-fried it, the taste was cheese-like and pleasant!
January 11, 2026 at 6:51 PM
Repeated losses of self-fertility shaped heterozygosity and polyploidy in #yeastevolution
January 9, 2026 at 7:53 AM
Reposted by Pfliegler Lab at University of Debrecen
The new year has just started and we are happy to share the news that the new issue of #Yeast (Volume 42, Number 12, December 2025) is finally out!!! 😀😀😀

This issue includes two research articles and two reviews.

You can browse it at this link:

onlinelibrary.wiley.com/toc/10970061...
Happy 40th birthday Yeast: Yeast: Vol 42, No 12
Yeast is a microbiology journal for research in the rapidly moving field of yeast biology. We publish the most significant developments in unicellular fungi.
onlinelibrary.wiley.com
January 5, 2026 at 2:47 PM
Reposted by Pfliegler Lab at University of Debrecen
Here is our first publication of 2026 which is the first article of a special issue that mark the journal 40 anniversary - happy new year to all the #yeast community
In this #Yeast review article, Jens Nielsen discusses how Saccharomyces cerevisiae has been used as both a model organism and a cell factory, shedding light on the molecular mechanisms of eukaryotic life but also boosting industrial biotechnology 💪💪💪

onlinelibrary.wiley.com/doi/10.1002/...
The Power of Yeast
Yeasts have been intimately connected with human civilization for millennia, originally used for fermentation in food and beverage production. This article explores the multifaceted roles of yeasts—p...
onlinelibrary.wiley.com
January 2, 2026 at 6:19 PM
imafungus.pensoft.net/article/1723... Global population genomics redefines domestication and clinical diversity in the Aspergillus flavus–oryzae complex. Our new paper w/ @balintnemeth.bsky.social finally online in IMA Fungus! This has been a long journey, the first idea of this global phylogeny...
Global population genomics redefines domestication and clinical diversity in the Aspergillus flavus–oryzae complex
Aspergillus flavus is a globally important human pathogen and agricultural contaminant, while its domesticated relative A. oryzae is widely used in food fermentation and biotechnology. Despite their importance, the evolutionary relationship, population structure and domestication history of these fungi remain unresolved. Here, we present the first global population genomic analysis of 639 A. flavus and A. oryzae isolates from clinical, environmental and food-fermentation sources across multiple continents. Our analyses reveal a complex evolutionary landscape comprising well-separated clades interspersed with highly admixed mosaic groups and potential evidence for multiple independent domestication events giving rise to A. oryzae. Clinical A. flavus isolates are distributed across several clades and mosaic groups, some overlapping with fermentation strains, highlighting an apparent role of domestication and admixture in shaping pathogen diversity. These results challenge current species boundaries and provide a framework for understanding evolutionary history, taxonomy and pangenomic architecture in these fungi, with broad implications for pathogenicity, food safety, biocontrol and metagenomic surveillance.
imafungus.pensoft.net
December 23, 2025 at 1:11 PM
"Despite their rarity, yeasts likely play disproportionate roles in nutrient cycling, plant growth, and host interactions". A global synthesis of #yeast in microbiomes
December 20, 2025 at 10:27 AM
An incredible agART - agar art from PhD students Andrea Harmath and @balintnemeth.bsky.social, depciting our lab's activities in #yeast research from fermentations to bioinformatics :)
December 19, 2025 at 12:45 PM
Reposted by Pfliegler Lab at University of Debrecen
As many of us 🎁 things up for the year, make sure all your ℹ️'s are dotted- and all your #yeast emojis are downloaded! If you haven't yet, make sure to add the emojyeast collection to all your 📱💻🖥️⌚️

mayaschuldiner.wixsite.com/schuldinerla...

Thanks to the amazing Schuldiner lab for these!
December 12, 2025 at 11:20 PM
The discovery and patterns of the underlying long-standing mild-effect mutator alleles in S. cerevisiae populations. #Saccharomyces #YeastEvolution
December 12, 2025 at 5:27 PM
Wow! Population-scale chemical response revealed by a barcoded yeast collection. #Saccharomyces
🚨 New preprint! 🚨@haploteam
We built a barcoded collection of 520 natural S. cerevisiae isolates and screened 600+ natural compounds. Six functional response clusters and 100+ GWAS associations reveal how natural variation shapes chemical sensitivity.
🔗 Read the preprint: doi.org/10.64898/202...
Population-scale chemical response revealed by a barcoded yeast collection
Natural genetic variation shapes how microbial populations adapt to environmental and chemical challenges, but scalable approaches to map genotype-phenotype relationships across diverse genetic backgr...
doi.org
December 11, 2025 at 8:25 PM
journals.asm.org/doi/10.1128/... Phylogenomic diversity of clinical #Saccharomyces cerevisiae and the prevalence of probiotic-derived isolates in a tertiary care center - our new paper in collab with @renatokovacs1.bsky.social , with PhD students @balintnemeth.bsky.social and Andrea Harmath! #yeast
Phylogenomic diversity of clinical Saccharomyces cerevisiae and the prevalence of probiotic-derived isolates in a tertiary care center in Hungary | Microbiology Spectrum
Saccharomyces cerevisiae is best known for its beneficial role in beer, bread, and wine production and is generally considered a harmless microbe. A specific subtype, S. cerevisiae var. “boulardii,” i...
journals.asm.org
November 27, 2025 at 9:58 AM
I'm honored and excited to participate in the The Human Frontier Science Program's Grant Writing Masterclass in Prague! It is great to be in this beautiful city, with the recent snow the Czech Academy of Sciences' Vila Lanna building looks fantastic!
November 24, 2025 at 9:28 AM
I first tried U Fleků and both of their house beers after arriving to Prague
November 23, 2025 at 7:54 PM
Reposted by Pfliegler Lab at University of Debrecen
The paper Margo Samorokov and I wrote for Brewery History Journal on Estonian farmhouse brewing is now available online, in case anyone is interested. www.breweryhistory.com/journal/arch...
www.breweryhistory.com
November 23, 2025 at 11:11 AM
Riding the train from Budapest to Prague for a grant writing masterclass, so far a really good experience! Can't wait to see the city for the first time! #lablife
November 23, 2025 at 3:33 PM
We are having a great time at NCSU with students @balintnemeth.bsky.social and Andrea Harmath, meeting with the Crook Lab and @alexandraimre.bsky.social over probiotics, with Ignazio Carbone at CIFR over Aspergillus, and soon with the @caitismuheil.bsky.social Heil Lab over yeasts! Wonderful place!
November 13, 2025 at 3:38 PM
We arrived to Raleigh, N.C. with my PhD students @balintnemeth.bsky.social and Andi, visiting collaborators including @alexandraimre.bsky.social and exploring the city! Here at Wye Hill Brewing.
November 13, 2025 at 12:06 AM
A photo I have been planning to make for a long time, at the Natural History Museum of London :) #Darwin
October 31, 2025 at 8:40 PM
My first ever English cask ale in London. We are visiting The Old Swan after Churchill Arms! Tasting an Old Golden Hen and an Abbot Ale!
October 29, 2025 at 7:48 PM
Reposted by Pfliegler Lab at University of Debrecen
The new issue of #Yeast is out ... with a surprise 😄! This issue marks the 40th anniversary of the creation of our journal, in 1985. To celebrate this achievement, we made a brand new cover with the most beautiful #Yeast front pages 😍

Happy birthday Yeast!!!

onlinelibrary.wiley.com/toc/10970061...
Happy 40th birthday Yeast: Yeast: Vol 42, No 8-10
Yeast is a microbiology journal for research in the rapidly moving field of yeast biology. We publish the most significant developments in unicellular fungi.
onlinelibrary.wiley.com
October 15, 2025 at 8:03 AM
Reposted by Pfliegler Lab at University of Debrecen
Phylogenomic signatures of repeat-induced point mutations across the fungal kingdom #Fungalevolution
Fungal #GenomeSize variation is largely driven by TEs & lineage-specific genome defenses. @tbadet.bsky.social & @danielcroll.bsky.social show that presence/absence of RIP mutation systems influences #genome architecture, identifying a likely novel defense mechanism @plosbiology.org 🧪 plos.io/4hcC5tx
October 16, 2025 at 3:44 PM