Robert de Vries
@rpdevrieslab.bsky.social
390 followers 270 following 60 posts
Virologist turned glycoscientist... Associate Prof @ Utrecht University Chemical Biology & Drug Discovery
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rpdevrieslab.bsky.social
Big shout out to @LiangRuonan and many thanks to @TheBoonsGroup , @UnioneLuca @UU_Glycoscience @uuuips.bsky.social
rpdevrieslab.bsky.social
The latter is vital, as many H3N2 viruses bind solely to these complex structures, and many zoonotic avian HAs, engineered to bind human-type receptors, do so as well.
rpdevrieslab.bsky.social
Significant observations indicate that the conserved 195Y, which changes to F, rescues binding properties in specific backgrounds. And symmetric N-glycans with tri-LacNAc arms are not displayed on human tracheal epithelial cells.
rpdevrieslab.bsky.social
She followed those results up with, amongst others, a tissue binding experiment on human tracheal tissues. As glycan binding is one thing, but binding tissues is another.
rpdevrieslab.bsky.social
Here, we aimed to identify the molecular determinant of tri- vs. di-LacNAc binding in strains that have circulated over the last 10 years. Ruonan created a mutant library and utilized complex N-glycans in an ELISA assay to assess specificity and avidity.
rpdevrieslab.bsky.social
And now published! #glycotime "Sialic Acid-Containing Glycolipids Extend the Receptor Repertoire of Enterovirus-D68" fantastic collaboration with @lisabauervirus.bsky.social @debbyvanriel.bsky.social @TheBoonsGroup enjoy 👍https://pubs.acs.org/doi/10.1021/acsinfecdis.5c00063
Reposted by Robert de Vries
viruseslikeitsweet.bsky.social
We are happy to share the first publication of our consortium:
pubs.acs.org/doi/10.1021/...
Sialic Acid-Containing Glycolipids Extend the Receptor Repertoire of Enterovirus-D68
Enterovirus D68 (EV-D68) emerged as a pathogen of increasing health concern globally, particularly due to its association with outbreaks of severe respiratory diseases and acute flaccid myelitis (AFM) in children. Knowledge regarding the tissue tropism and pathogenesis of EV-D68 within the respiratory tract and central nervous system remains limited, primarily due to an incomplete understanding of the host factors that facilitate the entry of EV-D68 into host cells. Several cellular receptors involved in EV-D68 infections have been identified, including ICAM-5, sialylated glycoproteins, and heparan sulfate (HS). Here, we investigate the receptor requirement of a panel of EV-D68 strains covering all clades, focusing on HS and sialosides utilizing glycan arrays. We found that all EV-D68 strains binding to HS harbor a cell culture adaptive substitution in the structural protein VP1 at position 271, which changes the amino acid into a positively charged one. Glycan array analyses revealed that EV-D68 strains prefer α2,6-linked sialic acids presented on N-glycans, α2,8-linked sialic acids on gangliosides, or both. Inhibition of glycolipid biosynthesis or multivalent glycolipid mimics confirmed that ganglioside structures serve as entry receptors for certain EV-D68 strains. Lastly, we examined whether EV-D68 strains that bind to HS or glycolipids require different uncoating mechanisms. Bafilomycin A1 minimally affected the cell entry of HS-binding EV-D68 strains B2/039 and B2/947, and the ganglioside preferring B1/2013 and other viruses were strongly inhibited. Together, we identified that EV-D68 strains can use disialoglycolipids as novel receptors and that different EV-D68 strains show a promiscuous sialic acid binding repertoire.
pubs.acs.org
rpdevrieslab.bsky.social
What a great thread and very interesting preprint 👍
rpdevrieslab.bsky.social
Happy Eurovision! Basel is awesome, getting ready for the final!🏳️‍🌈🇫🇮
rpdevrieslab.bsky.social
Bijvoet symposia 👍 #glycotime @uu-cbdd.bsky.social
bijvoet-centre.bsky.social
Great to have almost the entire Bijvoet Centre together for our 2025 Bijvoet Symposium! Looking forward to a lot of exciting science!
rpdevrieslab.bsky.social
Of course, we don't know if precisely these O-glycans enable these viruses' unique zoonotic capabilities, as many other virological and ecological factors are likely involved. However, we do like to hypothesize that these binding properties contribute to these capabilities.
rpdevrieslab.bsky.social
Another observation we made is that the cattle-derived recombinant virus had nearly identical receptor binding properties compared to one of the first 2.3.4.4 viruses isolated over 10 years ago. Receptor specificity is relatively conserved for 2.3.4.4 viruses.
rpdevrieslab.bsky.social
Our colleagues at @scripps.edu determined the structural features of these specificities. And i hope you can appreciate how the fucose lies in the receptor binding site. Fun observation is that we saw the peptide interacting with a very well-known epitope in the HA stalk
rpdevrieslab.bsky.social
Using these mucin-like O-glycans as a glycan array screen, we observed that these 2.3.4.4b were unique in their promiscuous receptor binding properties. These properties resulted in binding to human respiratory tract tissue while not binding human-type receptors.
rpdevrieslab.bsky.social
Many years ago, a carbohydrate chemist, Julia, started to synthesize mucin-like O-glycans, as they were greatly understudied. This was also when 2.3.4.4b H5Nx viruses were taking the stage.