S Otto
@sarperotto.bsky.social
3.6K followers 130 following 30 posts
evolution & math = a super interesting job
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Reposted by S Otto
wwfcanada.org
🚨 BREAKING: All major groups of wildlife in Canada are in decline

#LPRC2025: Across 910 species of birds, fish, mammals, reptiles & amphibians, wildlife populations in Canada have declined by 10%, on average, since 1970.

BUT not all is lost. Together, we can help nature heal & wildlife recover.
Reposted by S Otto
jpodwyer.bsky.social
@sarperotto.bsky.social and I are back for the @smtpb.bsky.social, interviewing Warren Ewens. "Get out of that ivory tower and do something useful" might seem unlikely advice for a mathematical population geneticist, but this was key for Warren. Full interview here:

www.youtube.com/watch?v=d_K_...
Reflections on Modeling and Theory in Population Biology: Warren Ewens
YouTube video by SMTPB
www.youtube.com
sarperotto.bsky.social
At least humerus is right, just spelled wrong!
Reposted by S Otto
jpodwyer.bsky.social
For “Reflections on the history of modeling and theory”, @sarperotto.bsky.social and I met with Joel Cohen. We learn how he navigated math and biology, the value of embracing ignorance, and what is a population. Or really, what _isn't_ a population: www.youtube.com/watch?v=RCt9...
@smtpb.bsky.social
Reflections on Modeling and Theory in Population Biology: Joel Cohen
YouTube video by SMTPB
www.youtube.com
Reposted by S Otto
judithmank.bsky.social
We are looking for new manager for our computing unit! If you have experience in both biology and computers, this might be the perfect job for you! UBC is a lovely place, and Zoology is a fantastic, collaborative and kind department. Apply by May 4th at ubc.wd10.myworkdayjobs.com/ubcstaffjobs...
Biosciences Computing Manager
Staff - Non Union Job Category M&P - AAPS Job Profile AAPS Salaried - Information Systems and Technology, Level D Job Title Biosciences Computing Manager Department Administrative Leadership | Dep...
ubc.wd10.myworkdayjobs.com
Reposted by S Otto
aklane.bsky.social
Don’t get too distracted. This is the fourth student (and the fourth university) as far as I know to get snatched by ICE in just the last few days.

It’s only going to get worse from here.
Reposted by S Otto
angierasmussen.bsky.social
I’m not going to be able to tell you about the consequences of EVERY lost grant, but I’m going to try.

Let’s start with the Antiviral Drug Discovery (AViDD) program for pathogens of pandemic concern! It just got unceremoniously shitcanned.
Antiviral Drug Discovery (AViDD) Centers for Pathogens of Pandemic Concern

(TEM image)



Transmission electron micrograph of SARS-CoV-2 virus particles (yellow) within endosomes of a heavily infected nasal Olfactory Epithelial Cell.
Credit: NIAID
Reposted by S Otto
carlzimmer.com
Trump administration to cut vaccination funds. "The loss of U.S. support may mean 75 million children do not receive routine vaccinations in the next five years, with more than 1.2 million children dying as a result," reports @stephanienolen.bsky.social Gift link: www.nytimes.com/2025/03/26/h...
U.S. to End Vaccine Funds for Poor Countries (Gift Article)
A 281-page spreadsheet obtained by The Times lists the Trump administration’s plans for thousands of foreign aid programs.
www.nytimes.com
sarperotto.bsky.social
3/3 We can do better! Data lags shortened dramatically during the SARS-CoV-2 pandemic, improving the ability of scientists to track mutations of public health concern and providing early warning signals that lead to protecting the vulnerable and informing the public. @seanedgerton.bsky.social
sarperotto.bsky.social
2/3 We included only countries with ≥50 submissions; among these, GDP per capita didn't account for delays. Human cases were shared rapidly (15 days), but data from animals, especially wildlife, often take months to release. 🦢Shout out to Netherlands & Czech Republic, submitting data within a month!
sarperotto.bsky.social
1/3 How long do you think it takes for highly pathogenic avian flu H5N1 sequences to be uploaded to GISAID after collection? How long should it be? In this commentary, we find a median delay of 228 days, with half the countries taking more than 6 months. rdcu.be/eeZGU @naturebiotech.bsky.social
Lengthy delays in H5N1 genome submissions to GISAID
Nature Biotechnology - Lengthy delays in H5N1 genome submissions to GISAID
rdcu.be
Reposted by S Otto
vscooper.micropopbio.org
My OpEd in @elife.bsky.social

“It feels as if we are trying to fight a series of attacks on science with one arm tied behind our back and our lips half sewn shut.”

“Yet we are not beaten, and some of us are downright energized.”

elifesciences.org/articles/106...
Science Under Threat in the United States: Feeling abandoned but energized
Many individual researchers are frustrated by the response - or the lack of a response - from universities to a growing crisis.
elifesciences.org
Reposted by S Otto
lizneeley.bsky.social
This is terrible news & just one part of a bigger picture.

Prepare yourself for ongoing updates about the “reduction in force” this month and more again in April.

Talk to your community about it. They may not believe it at first - it sounds unbelievable! But we must bear witness & explain.
Reposted by S Otto
aerinj.bsky.social
Looking for a postdoc in 🇨🇦?

Liber Ero Fellowship
liberero.ca

* Applied conservation science
* Leadership training
* Open to int’l applicants
* Due Nov 1

🌎🧪🦤
Liber Ero Fellowship Program
liberero.ca
Reposted by S Otto
fionabrinkman.bsky.social
Interesting. No alarm bells, but still Erin Gill @makemydna.bsky.social checked this saltation using her SMDP app eringill.shinyapps.io/covid_mutati... finding it most fits the mutation distribution of a chronic infection. Chronic infections are still a source of novelty (cc @sarperotto.bsky.social)
This BA.3 saltation best fits a chronic infection mutation distribution - approximately 10^6 times more likely than the global Omicron distribution in the SMDP app.
Reposted by S Otto
mathildetissier.bsky.social
"As scientists, we know we simply cannot ignore the link between human health and well-being and the health and survival of wild species, ecosystems and our planet. No amount of economic growth is going to insulate us from the continued deterioration of critical life support systems. "
molszyns.bsky.social
In the calls to defend Canada, we’re getting a one-dimensional perspective: increased resource extraction & exploitation.

But what if your #cdnpoli includes its wilderness, which sustains us & the good life we enjoy here? Thanks @wcscanada.bsky.social for this piece:

thenarwhal.ca/opinion-worl...
World Wildlife Day sparks call for bolder approach | The Narwhal
A leading Canadian scientist says cutting ‘red tape’ and doubling down on extractive resource development won’t help wildlife — or humans
thenarwhal.ca
Reposted by S Otto
Reposted by S Otto
whysharksmatter.bsky.social
Today, a broad coalition of scientific professional societies who represent over 92,000 scientists are speaking out against the politicization and demonization of Federally funded science and government scientist jobs.

It was an honor to help the Union of Concerned Scientists with this! 🧪🌎
48 Scientific Societies Representing Almost 100,000 Scientists Ask Congress to Protect the Future of Science
48 scientific societies representing almost 100,000 scientists signed on to a letter asking Congress to protect the future of science
www.ucsusa.org
sarperotto.bsky.social
Want an uplifting podcast that’s a great antidote to the current attacks on justice, equity, diversity and inclusion? Thank you Dr. Emilia Huerta-Sanchez and Rori Rohlfs! www.sciencewisepodcast.org
ScienceWise
80 Waterman St. ​, Providence, RI 02912 FAQ Terms of Use
www.sciencewisepodcast.org