@nfdi4bioimage.bsky.social Task Area Leaders Josh Moore and Christian Tischer will introduce participants to the history and basics of OME-Zarr at the international 2025 OME-NGFF Symposium from November 10–11 in Zurich, SW.
Register here:
👉 www.ema.uzh.ch/de/register/...
Picture by BioVisionCenter

Join the new plugin sustainability initiative!

Everyone is invited to fill out this interest form: forms.gle/iwX6P4tuooHK...

Follow along with initial discussion on Zulip: napari.zulipchat.com#narrow/chann...

The first zoom meeting will be this coming week: napari.org/stable/commu...

BioImage analysis friends - King's are recruiting for a full-time, permanent facility position! Come and work with fun microscopes and fun people (and me!) - please share! www.kcl.ac.uk/jobs/126345-...

📣 We’re hiring, please RT! Fully funded 4-year PhD position in our CVPD group at @informatikaehu.bsky.social!

Research at the intersection of AI, deep learning & bioimage analysis. 🧠🔬

📅 Applications open Oct 6 (deadline: ~Oct 27)
📍 San Sebastian, Spain.
👉 cvpd.github.io/post/2025-09...

✍ If you're having difficulty writing #BioimageAnalysis code that enables others to follow your workflow, have a look at @haesleinhuepf.bsky.socials slides on „Reproducible Bio-Image Analysis using Python, Napari, Jupyter and AI“ from the #EMBOlsm25.
To the slides: 👉 doi.org/10.5281/zeno...

Our new collection offers cell biologists practical, expert-driven guidance and best practices in the design, execution, and analysis of experiments, and the subsequent communication of their results to their peers. 👉 rupress.org/jcb/collecti...

#Reproducibility

A huge thank you to the wonderful colleagues I had the pleasure to work with at the BioImage Informatics facility, @scilifelab.se @nbis.se).

I learned so much tackling tough bioscience puzzles with them, and I'm so excited to be bringing all that experience to my own projects and teaching now! 😊

Thrilled to announce that I'm back in Buenos Aires and open for image & data analysis projects!

My focus is turning images from bioscience, ecology, & more into actionable data. I'm available for collaborations in Argentina and internationally.

Check out my portfolio and contact:
acorbat.github.io

Next one in the #GloBIAS seminar series: Behind the Scenes at SciLifeLab BIIF: Lessons from Managing a National Bioimage Analysis Support Unit. Presented by Anna Klemm, head of BioImage Informatics Infrastructure Unit, Uppsala University, Sweden

Wednesday, 27th of August, 2pm CEST

We're happy to announce the 2025 International OME-NGFF workshop 🎉

📅 Dates:
- Symposium: Nov 10–11, 2025
- Hackathon: Nov 12–14, 2025

📍 Location: Zurich, Switzerland

Full details & registration: www.biovisioncenter.uzh.ch/en/events/Up... 

#bioimaging #openscience #OMENGFF #OMEZarr

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Se extendió el deadline!
Aprovechen para aplicar a este curso de análisis de imágenes 3D en Chile🔬. Todavía hay ayudas economicas para viajes🛩️!
Más información en los links 👇...

Thanks to everyone in the #GloBIAS Survey 24 workgroup! Lots of work, fun, and sometimes a bit of time zone confusion. But we got there ;-)

📣El preprint de @globias.bsky.social esta disponible en arXiv! Fue un placer poder trabajar con un grupo internacionial en este proyecto!!!

En el trabajo presentamos resultados de una encuesta indagando cuales son las necesidades de analistas de bioimagenes y como GloBIAS busca trabajar en ellas.

Second round of hashtag#GloBIAS Free Help (previously Call4Help) is happening in May. You can register for the sessions on our webpage: www.globias.org/activities/g...
Registration deadline is 7. May 2025.

🚨Latin American Workshop Series🚨

The team from @bethcimini.bsky.social‘s lab at @broadinstitute.org and the Center for Open Bioimage Analysis will host three free online image analysis workshops for LATAM ... in SPANISH🇪🇸 and PORTUGUESE🇧🇷!!!🎉🎊

broad.io/latam_worksh...

Deadline: April 23rd, 2025

🚀 We’re very excited to share our latest preprint on OME-Zarr! 🚀

Our report on the 2024 OME-NGFF Workflows Hackathon is a deep dive into the status of OME-Zarr and the great work that happened last November at the BioVisionCenter in Zurich.

🔗 Read the preprint: osf.io/preprints/bi...

🧵 (1/15)

I write notes for a couple reasons:
1. Reusability: when I publish the slides, other people can read what I would have said and reuse the slides.
2. Accessibility: People hard of hearing can follow the slides when live transcript is not available.
3. Studying: slides contain minimum text...

Truly proud of everyone at QUAREP LiMi WG11. We defined “bare-minimal” guidelines for microscopy reporting to improve reproducibility in light microscopy. Check out our Zenodo upload! zenodo.org/records/1497.... Thank you all who contributed! Our comprehensive guidelines will come next!

At this week's #VirtualPub, we welcome Jim Swoger, @embl.org in Barcelona, on "Cell 3D Positioning by Optical Encoding (C3PO) and its application to spatial transcriptomics." Join us!
🗓️ Friday, March 14 @ 13:00 CET
Register 🔽
buff.ly/gcvGlV8

a prerelease web page for the GloBIAS 2025 conference in Kobe, Japan: bioimaging.riken.jp/globias2025/

Keep your dates! Oct 26 - Oct 31, 2025

🚨 Save the Date! 🚨
AI4Life & @globias.bsky.social are hosting a 4-part webinar series to showcase AI4Life services and lessons learned.

📅 When: Feb 13, Apr 10, Jun 12, Aug 14
🖥️ How: Online | 🎥 Recorded
🔗 Registration: bit.ly/registration...

Applications for our Quantitative Imaging: From Acquisition to Analysis 2025 course (Mar 24-Apr 8) are due on Jan 31! Come immerse yourself in microscopy and image analysis with me, @talleylambert.bsky.social, @bethcimini.bsky.social, @florianjug.bsky.social & Hunter Elliott! Please RT

We are looking for our next cohort of #FocalPlaneCorrespondents! If you are interested in getting some #scicomm experience alongside your research, check out our call and drop us an email if you have any questions.

Deadline for applications: 20 January 2025