Daniel Friedrich
@friedrichlab.bsky.social
54 followers 71 following 18 posts
Research Group Leader @chemunicologne.bsky.social‬ at University of Cologne (@unicologne.bsky.social‬) in Biomolecular #NMR Spectroscopy | We are interested in structural analysis of proteins, peptides and nucleic acids. https://nmr.chemie.uni-koeln.de/
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Reposted by Daniel Friedrich
bwjones.bsky.social
Really interesting to see some basic science research coming out of Apple Inc. SimpleFold: Folding Proteins is Simpler than You Think arxiv.org/abs/2509.184...

tldr: Apple used flow matching models to more efficiently predict protein folding structures.

More of this, please... from ALL big tech.
SimpleFold: Folding Proteins is Simpler than You Think
Protein folding models have achieved groundbreaking results typically via a combination of integrating domain knowledge into the architectural blocks and training pipelines. Nonetheless, given the suc...
arxiv.org
friedrichlab.bsky.social
Congratulations to the Behrmann and Schwarz labs at Institute of Biochemistry @chemunicologne.bsky.social for this fantastic work! 🎉 #StructuralBiology in Cologne is on fire 💥
unicologne.bsky.social
🧠 How Synapses Hold Together 🤝

This #discovery was made by a research team @bccologne.bsky.social studying the molecular architecture of #synapses. The study shows that the protein #gephrin forms flexible filaments in the brain, serving as an important building block of inhibitory synapses.
Molecular structure model of the gepherin protein complex on a gray background, with colored segments: yellow, blue, gray, red, and green, representing the protein subunits.
friedrichlab.bsky.social
Huge congratulations again @kathlab.bsky.social ! 👏 So much deserved and we are incredibly glad to have you @chemunicologne.bsky.social! 🍾🎉
friedrichlab.bsky.social
I enjoyed the talk by Harald Schwalbe @schwalbe-lab.bsky.social very much, especially the #NMR work on #RNA structure and dynamics! #FGMR #GDCh
schwalbe-lab.bsky.social
At the 2025 meeting of the German focus group of Magnetic Resonance (FGMR, EPR/NMR), Harald Schwalbe, Instruct-director, introduced access possibilities and highlighted the recent installation of the German Instruct centre.

@instruct-eric.bsky.social @gdch.de

#NMR #EPR #FGMR #GDCh #InstructERIC
Reposted by Daniel Friedrich
nmr900.bsky.social
Postdoctoral position in viral protein NMR, Prof Anja Böckmann, The protein solid-state NMR laboratory within the Molecular Microbiology and Structural Biochemistry (MMSB) unit in the Lyon Gerland Bioscience Campus mmsb.cnrs.fr/en/

emploi.cnrs.fr/Offres/CDD/U... #NMRjobs #NMRchat 🧲
Portail Emploi CNRS - Offre d'emploi - Postdoctoral position in viral protein NMR (M/F)
emploi.cnrs.fr
friedrichlab.bsky.social
Very nice work by the Wöhnert group, determining an intersting RNA structure using #NMR!
schwalbe-lab.bsky.social
Exciting work from Duchardt-Ferner et al. in NAR: high-res. NMR structure of a tobramycin-responsive riboswitch. Shows a novel aminoglycoside-binding RNA motif with unique RNA-RNA contacts, explaining its exceptional switching efficiency in eukaryotic translation.
academic.oup.com/nar/article/...
Structural basis for ligand recognition in the tobramycin riboswitch
Abstract. Recently, a novel tobramycin-responsive riboswitch was developed by a combination of Capture-SELEX and in vivo screening. This riboswitch regulat
academic.oup.com
Reposted by Daniel Friedrich
schwalbe-lab.bsky.social
Exciting work from Duchardt-Ferner et al. in NAR: high-res. NMR structure of a tobramycin-responsive riboswitch. Shows a novel aminoglycoside-binding RNA motif with unique RNA-RNA contacts, explaining its exceptional switching efficiency in eukaryotic translation.
academic.oup.com/nar/article/...
Structural basis for ligand recognition in the tobramycin riboswitch
Abstract. Recently, a novel tobramycin-responsive riboswitch was developed by a combination of Capture-SELEX and in vivo screening. This riboswitch regulat
academic.oup.com
Reposted by Daniel Friedrich
paulschanda.bsky.social
New publication: Arginine dynamics probed by magic-angle spinning NMR with a specific isotope-labeling scheme

Our selective arginine labeling yields well-resolved 1H-detected spectra in solids (and solution). We apply it to study dynamics in crystalline ubiquitin and a >130 kDa large enzyme

1/2
Reposted by Daniel Friedrich
teamthomma.bsky.social
📣 Massively proud of this ⬇️ great study, led by the brilliant @mesny.bsky.social surprisingly uncovering that many pathogen effectors stem from ancient antimicrobials 🤯 #EffectorWisdom #EvoMPMI
friedrichlab.bsky.social
I‘m already looking forward to join this very interesting #NMR symposium and to meet friends from the good old times at @fmp-berlin.de! It’s still time to register!
fmp-berlin.de
⏰Join us for the NMR Symposium, Nov 26–27, 2025, celebrating our new 1.2 GHz NMR spectrometer. To present a poster, send your abstract to [email protected]. Registrations are open until September 15th!
friedrichlab.bsky.social
Such a beautiful cover for @jacs.acspublications.org designed by @barthvanrossum.bsky.social! Nice #NMR work by the Lange lab at @fmp-berlin.de!
fmp-berlin.de
Great cover art by @barthvanrossum.bsky.social for @jacs.acspublications.org: Influenza lifecycle showing M2’s roles, from activation in the low-pH endosome to viral uncoating, RNA release, and budding of new particles. View the article from the Lange lab here: pubs.acs.org/doi/10.1021/...
friedrichlab.bsky.social
Great work involving #NMR by @delvallelab.bsky.social in @jacs.acspublications.org on intrastrand side chain stapling of peptides, very interesting read!
pubs.acs.org/doi/10.1021/...
Intrastrand Peptide Staples That Promote β-Sheet Folding, Self-Assembly, and Amyloid Seeding
Side chain stapling of cysteine (Cys) residues offers convenient entry into constrained peptides with enhanced bioactivity and bioavailability. Despite its widespread application in the constraint of α-helical, PPII, and loop conformations, the stabilization of β-sheet folds via intrastrand side chain Cys stapling remains largely unexplored. Here, we demonstrate that i→i+2 stapling with E-butenyl, butynyl, and m-xylyl linkers significantly enhances the folded population of two distinct β-hairpin model peptides. High-resolution NMR structures reveal that these staples support canonical β-sheet backbone torsions and stabilize cross-strand interactions. Leveraging the maintenance of intact backbone hydrogen-bonding edges, we employed i→i+2 side chain macrocyclization in the design of constrained β-arch peptides derived from the tau protein. We show that intrastrand stapling of a nonaggregation-prone segment promotes self-assembly into β-sheet-like filaments. The resulting filaments also seed the aggregation of endogenous tau in a cell-based assay in a macrocycle- and sequence-dependent manner. These findings establish di-Cys i→i+2 stapling as a versatile and synthetically accessible method to stabilize β-sheet structure and modulate the self-assembly of seed-competent amyloidogenic peptides.
pubs.acs.org
Reposted by Daniel Friedrich
yolandapereznmr.bsky.social
📢Happy to announce that we have been awarded national funding for the ARBICAT project by @ageinves.bsky.social for the next 3 years.
It's a huge honour to be leading this project as a co-PI alongside Pere Clapés, exploring NMR methods for developing new ARtificial BIoCATalysts.

#PID2024 #NMRchat
friedrichlab.bsky.social
Highly recommended read for everyone interested in interactions of proteins and DNA: Impressive new method on single cell level introduced by @epistrucstab.bsky.social from @unicologne.bsky.social!
unicologne.bsky.social
🔬 New: Method for mapping protein-DNA interactions developed 💡
@epistrucstab.bsky.social #UniCologne has developed DynaTag, a method that detects the binding of proteins to DNA even in a single cell. This is crucial for gene regulation and the development of diseases like cancer. 🧬👇

uni.koeln/LXJQE
New method developed for mapping protein binding to DNA
A research team at the University of Cologne has developed a method called DynaTag, which can detect the binding of proteins to DNA, even in an individual cell. Interactions of proteins with DNA are c...
uni.koeln
friedrichlab.bsky.social
We are so grateful for the outstanding work by our students Michael Quagliata and Joshua Grabeck, and we are looking forward to our future endeavors in peptide research to help fighting the antibiotic crisis! 3/3
friedrichlab.bsky.social
This is a fantastic and fun collaboration with the groups of Ines Neundorf at our Department @chemunicologne.bsky.social of @unicologne.bsky.social, and Anna Maria Papini and Paolo Rovero at University of Florence. 2/3
friedrichlab.bsky.social
I am deeply grateful for the excellent support by my colleagues @chemunicologne.bsky.social, especially @kathlab.bsky.social and @riemerlab.bsky.social! Feel free to approach us if you are interested in learning and applying NMR to study #RNA, #IDPs, and their interactions!
friedrichlab.bsky.social
We will use these funds to establish a cutting-edge combined research and teaching program using #NMR for time-resolved structural studies of RNA-mediated epigenetic inheritance.
friedrichlab.bsky.social
Great news for all students @unicologne.bsky.social interested in #structuralbiology, in particular @chemunicologne.bsky.social and at the Department of Biology: We are very honoured to receive funding through the 2025 #Fulbright-Cottrell Award!