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Gisela Gabernet @ggabernet.bsky.social · 29d

Do you want to share your research using Immcantation? Abstract submission for the Immcantation Users Meeting 2026 is now open until October 1st!

fanofactor 🧬💻 @fanofactor.bsky.social · Aug 28

🚨 Immcantation.org user or interested in #Bcell repertoire analysis?
🗓️ Join the FREE virtual 2026 Immcantation Users Group Meeting
📅 Jan 22, 2026 | ⏰ 10AM–1:30PM ET
📢 Abstracts due Oct 1, 2025
🔗 immcantation.github.io/users-meeting/2026

#AIRRseq #Immcantation

2026 Immcantation Users Group Meeting. Important information summary:
Who: open to the public
When: January 22nd, 2026
Time: 10:00 am - 1:30 pm ET
Where: Virtual
Fee: Free
Abstracts due: October 1st, 2025
Final program: December 1st, 2025

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Gisela Gabernet @ggabernet.bsky.social · May 28

Interested in analyzing BCR / TCR single-cell or bulk datasets? Join the hands-on training on using nf-core/airrflow, a Nextflow pipeline to process start-to-finish AIRRseq data using the Immcantation framework.

🕑 June 12th 10-11:30 ET
💻 Virtual
💸 It's free!

Registration: nf-co.re/events/2025/...

nf-core/airrflow metro map showing the included analysis steps.

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Gisela Gabernet @ggabernet.bsky.social · May 4

At #AAI2025 and interested in high-throughput BCR/TCR single cell and bulk data analysis? Come talk to me at poster #408 from 14:15 to 15:30! I’ll be presenting nf-core/airrflow, a Nextflow workflow using the Immcantation framework @immcantation.bsky.social @nf-co.re

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Reposted by Gisela Gabernet

HIPC @hipcproject.bsky.social · Apr 28

Coming to @aai.org in Honolulu? 🌴🔬
Join #symposium May 6 at 8:30 a.m.
Also booths #535 #537, shared with
@iedb.bsky.social
@airr-community.bsky.social
#AAI2025
Speakers include
@settelab.bsky.social
@lungdrc.bsky.social
@victoriazyulina.bsky.social

immunology2025.aai.org/guest-sympos...

a neon sign of palm trees and a surfboard on a brick wall

Alt: a neon sign of palm trees and a surfboard on a brick wall

media.tenor.com

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Gisela Gabernet @ggabernet.bsky.social · Mar 31

Do you analyze large BCR and TCR sequencing datasets?

Answer our survey for improving nf-core/airrflow, a Nextflow pipeline to analyze bulk and single-cell AIRRseq data (doi.org/10.1371/jour...). We’re interested in your opinion on useful new features!

yalesurvey.ca1.qualtrics.com/jfe/form/SV_...

nf-core/airrflow: An adaptive immune receptor repertoire analysis workflow employing the Immcantation framework

Author summary We have created nf-core/airrflow, a workflow to help researchers study the immune system in healthy and disease states, such as infections, autoimmunity, and cancer. The adaptive immune...

doi.org

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Reposted by Gisela Gabernet

Marc Veldhoen @marcveld.bsky.social · Nov 30

Persistence of spike protein at the skull-meninges-brain axis may contribute to the neurological sequelae of COVID-19

Some unrest and abuse about this paper- Parts of the pre-print have been abused previously. What does it show?

www.cell.com/cell-ho...
1/10

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Reposted by Gisela Gabernet

Dr Steven White @drstevenmwhite.bsky.social · Nov 29

Impressive! www.nature.com/articles/d41...

This malaria vaccine is delivered by a mosquito bite

Bites from insects infected with modified malaria parasites boosted immunity and stopped people from contracting the disease.

www.nature.com

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Reposted by Gisela Gabernet

Itai Yanai @itaiyanai.bsky.social · Nov 9

Doing good science is 90% finding a science buddy to constantly talk to about the project.

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Reposted by Gisela Gabernet

Jamie Heather @jamieheather.bsky.social · Nov 18

Inspired by @rodrahimi.bsky.social 's noble efforts linking immunologists together over here, let's try and get more specifically TCR/BCR/AIRR/repertoire chat going with this starter park
go.bsky.app/Gi2dcGd
Drop me a beep to get added or suggest others!

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Gisela Gabernet @ggabernet.bsky.social · Nov 21

I’d like to be added if still accepting people

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