Julian Kompa
@juliankompa.bsky.social
450 followers 160 following 17 posts
PhD student in the group of Kai Johnsson, Chemical Biology department of Max Planck Institute for Medical Research Heidelberg | Interested in labeling strategies for super-resolution microscopy
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Reposted by Julian Kompa
thornsesholdlab.bsky.social
Chemically Induced Dimerisation, modular & on-demand:

=> Fast, stepwise reagents for HaloTag-to-SNAP-tag heterodimerisation without a hook effect

Now preprinted: doi.org/10.1101/2025...

Congratulations to Philipp Mauker & the CHalo Crew for programming with HaloTag!
#chembio #fluorescence #friday
Reposted by Julian Kompa
abberior.rocks
Don’t miss the chance to learn about MINFLUX sample preparation!
Register now for our webinar on Wednesday, October 1, 15:30 CEST: link.abberior.rocks/sampleprep
#MINFLUX #SMLM #superresolution #SamplePrep
Reposted by Julian Kompa
jclandoni.bsky.social
Order, chaos & complexity

#Mitochondria in #muscle cells 💪🔬, color-coded by 3D depth 🧪
Reposted by Julian Kompa
Reposted by Julian Kompa
sanchezlab.bsky.social
We are searching for a talented master student to join our team! Please apply
Reposted by Julian Kompa
florianschueder.bsky.social
🚨 2 × PhD positions @EPFL! 🚨
Help us push the boundaries of fluorescence microscopy - DNA nanotech, custom optics & spatial omics in Lausanne 🇨🇭. Start Jan 2026. Send CV + motivation + 2 refs → [email protected]
#PhD #Hiring #microscopy #SuperResolution #SpatialOmics #DNAPAINT #FLASHPAINT
Reposted by Julian Kompa
ulrichschwarz.bsky.social
Opening for a professorship in multimodal imaging in the context of our cluster of excellence #3DMM2O. Here is the full advertisement with all details: tinyurl.com/2ksy2b2s
juliankompa.bsky.social
We propose the elimination of thioethers as a general strategy to enhance the photostability of self-labeling protein tags. Happy that we could support this mechanism with a MS analysis. The M175L mutation of HaloTag yields up to 4-fold more photons. 🎇 (4/4)

www.pnas.org/doi/abs/10.1...
Thioether editing generally increases the photostability of rhodamine dyes on self-labeling tags | PNAS
Self-labeling protein tags are widely used in advanced bioimaging where dyes with high-photon budgets outperform their fluorescent protein counterp...
www.pnas.org
juliankompa.bsky.social
Kinprola is based on split-HaloTag and records the activity of, for instance, PKA via chemical labeling in live cells. 📈

The kinase activity is reflected by the accumulation of a permanent fluorescent signal and can be correlated with transcriptomics. (3/4)

www.nature.com/articles/s41...
Molecular recording of cellular protein kinase activity with chemical labeling - Nature Chemical Biology
Molecular recorders based on kinase activity-dependent protein labeling track specific kinase activities to understand their link to cellular phenotypes in heterogeneous cell populations and in vivo.
www.nature.com
juliankompa.bsky.social
Productive weeks at the Chemical Biology department at @mpi-mr @kjohnsson 🎉
Check out the fantastic work by @steffi-k on SNAP-tag2 and @deensun3 on KinProLa in @natchembio.nature.com

We also released a great collab with @zhixingchen2 on the photophysics of self-labeling tags in @pnas.org. (1/4)
Reposted by Julian Kompa
rcsbpdb.bsky.social
Transitioning to PDBx/mmCIF and Extended PDB IDs
PDB users are strongly encouraged to make changes to software; use the full 12-character ID in all communications; and encourage others to adopt ASAP

Details at wwPDB: www.wwpdb.org/news/n...
Reposted by Julian Kompa
lucygdornan.bsky.social
Hello microscopists!! Help needed - does anybody know of any good Mn2+ indicators that are good in live cell microscopy assays ?

Never worked with them before and not sure if there are any reliable & affordable ones out there..? Reposts appreciated 🙏🙏
Reposted by Julian Kompa
Reposted by Julian Kompa
kjohnsson.bsky.social
Please check out our new high-affinity split-HaloTag for live-cell protein labeling www.biorxiv.org/content/10.1...
Congratulations to Yin-Hsi Lin!
www.biorxiv.org
Reposted by Julian Kompa
emmanuelmargeat.bsky.social
Applications are now open for the 4th edition of the “Ecole de Physique des Houches” on Fluorescence Markers for Advanced Microscopies, a WE-Heraeus seminar.
March 15th-20th 2026
Join us to learn everything you wanted to know about Fluorescent Markers for advanced microscopies.
juliankompa.bsky.social
The next generation of bright rhodamine probes (BD dyes) from @zhixingchen2.bsky.social's lab raises the bar for photostability 🤩
juliankompa.bsky.social
Congrats on opening your own lab in Frankfurt @goetheuni.bsky.social , Till 👏🏼
Looking forward to future fancy images and interesting biology! 🦠🔬
stephanlab.bsky.social
Excited to share my first post on Bluesky: I’ve recently been appointed as a Professor at Goethe University Frankfurt! 🎉

The Stephan Lab will use advanced bioimaging 🔬🧫 to explore how organelles collaborate to maintain subcellular architecture and metabolism.
Reposted by Julian Kompa
wombacherlab.bsky.social
Happy to share our new publication in ACS Chemical Biology @pubs.acs.org reporting a new chemical biology tool – dual SLIPT! Congratulations to first author Kristina Bayer @XXX, all co-authors and collaborator Shige Yoshimura @XXX. Open Access:
pubs.acs.org/doi/10.1021/... (1/5)
Dual SLIPT–A Lipid Mimic to Enable Spatiotemporally Defined, Sequential Protein Dimerization
Spatiotemporal control of proteins is crucial for cellular phenomena such as signal integration, propagation, as well as managing crosstalk. In membrane-associated signaling, this regulation is often enabled by lipids, wherein highly dynamic, sequential recruitment of interacting proteins is key to successful signaling. Here, we present dual SLIPT (self-localizing ligand-induced protein translocation), a lipid-analog tool, capable of emulating this lipid-mediated sequential recruitment of any two proteins of interest. Dual SLIPT self-localizes to the inner leaflet of the plasma membrane (PM). There, dual SLIPT presents trimethoprim (TMP) and HaloTag ligand (HTL) to cytosolic proteins of interest (POIs), whereupon POIs fused to the protein tags iK6eDHFR, or to HOB are recruited. A systematic extension of the linkers connecting the two mutually orthogonal headgroups was implemented to overcome the steric clash between the recruited POIs. Using Förster resonance energy transfer (FRET), we verify that the resulting probe is capable of simultaneous binding of both proteins of interest, as well as their dimerization. Dual SLIPT was found to be particularly suitable for use in physiologically relevant concentrations, such as recruitment via tightly regulated, transient lipid species. We further expanded dual SLIPT to the photocontrollable dual SLIPTNVOC, by introducing a photocaging group onto the TMP moiety. Dual SLIPTNVOC enables sequential and spatiotemporally defined dimerization upon blue light irradiation. Thus, dual SLIPTNVOC serves as a close mimic of physiology, enabling interrogation of dynamic cytosol-to-plasma membrane recruitment events and their impact on signaling.
pubs.acs.org
Reposted by Julian Kompa