Manuel Liebeke
@manuelliebeke.bsky.social
990 followers 360 following 32 posts
Professor for Metabolomics, Kiel University and Head of Metabolic Interactions group, Max Planck Inst. for Marine Microbiology #spatialMetabolomics #host-microbe #metabolomics #massspec #hostmicrobe #spatialbiology #coffeelover
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Reposted by Manuel Liebeke
metabolomics-wcmc.bsky.social
We are truly proud of our Bits & Bites # 06: "Using MetaboAnalyst for Metabolomics Statistics and Data Visualizations" October 9, 2025, from 9 am to 1 pm Instructor: Dr. Jeff Xia, McGill University, register and pay: na.eventscloud.com/ereg/index.p...
#metabolomics @jjjvanderhooft.bsky.social
Reposted by Manuel Liebeke
acartmell47.bsky.social
Happy to have this collaborative work out on Biorxiv on how Akkermansia muciniphila deploys it’s carbohydrate sulfatases to metabolise colonic mucin, and that processed glycopeptides/proteins of colonic mucin are a favoured carbon source #glycotime.

www.biorxiv.org/content/10.1...
The role of Akkermansia muciniphila sulfatases in colonic mucin utilisation
Akkermansia muciniphila , an obligate mucin degrader, is a major member of the human colonic microbiota and has been associated positive health outcomes. Mucins are complex glycoproteins that contain ...
www.biorxiv.org
Reposted by Manuel Liebeke
irenemiguel-aliaga.bsky.social
Lab’s latest: (mouse) mums grow their guts during pregnancy and lactation: www.cell.com/cell/fulltex...
manuelliebeke.bsky.social
Did you try spatial Metabolomics? Pipecolic acid should ionize well. Depends on the cellular resolution needed. cool finding
Reposted by Manuel Liebeke
jeanmichelane.bsky.social
Deciphering microbial spatial organization: insights from synthetic and engineered communities | ISME Communications | Oxford Academic
Deciphering microbial spatial organization: insights from synthetic and engineered communities
Microbial communities are frequently organized into complex spatial structures, shaped by intrinsic cellular traits, interactions between community members, initial growth condition or environmental factors. Under- standing the mechanisms that drive these spatial patterns is essential for uncovering fundamental principles of microbial ecology and for developing applications. Using genetic engineering and synthetic microbial communities allows us to decipher how specific parameters influence spatial organization. In this review, we highlight recent studies that leverage synthetic microbial communities to deepen our understanding of microbial spatial ecology. We begin by exploring how initial conditions, such as cell density and relative species abundance, influence spatial organization. We then focus on studies that examine the role of individ- ual microbial traits, such as cell shape and motility. Next, we discuss the impact of contact-dependent and long-range interactions, including metabolite exchange and toxin release. Furthermore, we highlight the in- fluence of environmental factors on spatial dynamics. Finally, we address the current limitations of synthetic approaches and propose future directions to bridge the gap between engineered and natural systems.
academic.oup.com
manuelliebeke.bsky.social
We are hiring in Kiel (Germany) #Postdoc in #Metabolomics (LC-MS) with a focus on intestinal metabolomics in #health and #disease.
Together with my colleague Konrad Aden we are looking for a new team member #ECR. PM or email us for questions (see details www.arbeitsagentur.de/jobsuche/job...
PostDoc position (m/f/d) in intestinal metabolomics in health and disease bei Universitätsklinikum Schleswig-Holstein
Jobsuche der Bundesagentur für Arbeit. Hier Stellensuche nach neusten Jobs oder Ausbildungsplätzen starten in einer der größten Jobbörsen Deutschlands.
www.arbeitsagentur.de
Reposted by Manuel Liebeke
uni-kiel.de
Double success for Kiel University: The Clusters of Excellence 'Precision Medicine in Chronic Inflammation' (PMI) and 'ROOTS – Social, Environmental, and Cultural Connectivity in Past Societies' @clusterroots.bsky.social will be funded for another seven years!
Kiel University in the Excellence Strategy: Success for the two Kiel clusters PMI and ROOTS
The German Research Foundation announced which collaborative research projects will receive funding for the next seven years as Clusters of Excellence.
www.uni-kiel.de
Reposted by Manuel Liebeke
manuelliebeke.bsky.social
The 1st talks of our #metaorganism symposium in Kiel have been eye opening and fascinating! Microbes interacting with worms, squid, plants and jellyfish - so much novel cross talk shown. #symbiosis @crc1182.bsky.social