@thexavierlab.bsky.social
130 followers 25 following 27 posts
Genes to functions. Microbiome in health & disease. Computational biology. Chemical biology. Innate & adaptive immunity. http://broadinstitute.org/xavier-lab https://molbio.massgeneral.org/faculty/343
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Our findings offer a new target that could be useful for diagnosing or treating certain cases of depressive disorder. They also provide a roadmap for probing how other members of the gut microbiome influence human health and behavior.
Unusual Phospholipids from Morganella morganii Linked to Depression
A multifactorial association study detected a probable causal connection between the prevalence of Morganella morganii in the gut microbiome and the incidence of major depressive disorder (MDD) in the...
pubs.acs.org
In his “Harvard Medical School 2025 State of the School Address”, Dean George Daley highlighted our collaboration with the Clardy lab studying the connection between the gut microbiome and depression @harvardmed.bsky.social @broadinstitute.org

#vimeo #microbiome #depression #gut
Harvard Medical School 2025 State of the School Address
In the 2025 State of the School Address, Dean George Q. Daley described the challenges and opportunities ahead for Harvard Medical School and academic research.
vimeo.com
The @genelayinstitute.bsky.social
is excited to host its third #ReThinkNeuroimmunology meeting from October 14-16th, 2025. This year will focus on discussing major discoveries & breakthroughs in neuroimmunology, single cell genomics, immunology, & neuroscience.

genelayinstitute.org/rtn/
Our latest effort to translate genetic risk variants to disease mechanisms revealed that the R448G missense mutation in nuclear receptor coregulator NRIP1 promotes tissue inflammation via inefficient repression of a retinoic acid-mediated T cell gut-homing program. www.pnas.org/doi/10.1073/...
PNAS
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...
www.pnas.org
ANKRD55 is associated with risk for multiple autoimmune diseases, but without a clear mechanism. In a new @jem.org study, we show that ANKRD55 promotes differentiation of inflammatory T cells via mitochondrial regulation, suggesting a new target for autoimmunity: rupress.org/jem/article-...
Autoimmune disease risk gene ANKRD55 promotes TH17 effector function through metabolic modulation
The ANKRD55 locus has been associated with multiple autoimmune diseases. Using murine models of inflammation, Xu et al. demonstrate an important role of th
rupress.org
Reposted
jem.org
Xu, @thexavierlab.bsky.social et al @harvardmed.bsky.social @broadinstitute.org reveal an important role of the ANKRD55 protein in TH17 biology, where its deletion impairs T cell proliferation & effector cytokine production through metabolic dysregulation. rupress.org/jem/article/...

#Autoimmunity
For a great example of complex science presented clearly and compellingly, check out this Base by Base PaperCast episode! It covers a recent @finngen.bsky.social n study showing protective effects of CFHR5 loss-of-function against age-related macular degeneration.

Links below 👇
️ 92: Genetic Loss of CFHR5 Function Protects Against Age-Related Macular Degeneration
️ Episode 92: Genetic Loss of CFHR5 Function Protects Against Age-Related Macular Degeneration In this episode of PaperCast Base by Base, we explore a genome‑wide association and fine‑mapping study in...
basebybase.castos.com
Online now a multicenter Crohn's Disease study of South Asian patients that explores environmental impacts on #CD, linking geography and immigrant status with disease presentation and serologic markers.

linkinghub.elsevier.com/retrieve/pii...

#crohnsdisease
Redirecting
linkinghub.elsevier.com
This finding suggests that molecular patterns could be more useful categories for microbiome-driven immune regulation than taxonomy. (2/2)

Read the study in JACS – pubs.acs.org/doi/10.1021/...

@broadinstitute.org
@mgbresearch.bsky.social
Eggerthella lenta Produces a Cryptic Pro-inflammatory Lipid
Eggerthella lenta is both one of the most studied and least understood members of the human gut microbiome. Most of the interest in this Gram-positive anaerobe originates from multiple robust associations of its population with a variety of autoimmune diseases, perhaps most notably inflammatory bowel disease (IBD). The links between bacteria and inflammation are only partially known. Inflammation is driven by Th17 cells and their inflammatory cytokine IL-17, and the population of these cells is promoted by a transcription factor, RORγt. Bacterial metabolites appear to activate RORγt in a cell- and antigen-independent fashion, but the metabolites and their activating mechanism are unknown. This report describes an assay-driven search for pro-inflammatory metabolites from E. lenta that revealed a plasmalogen-triggered plasmalogen pair that forms a single molecule signal transduction device. Small electrophiles characteristic of inflammatory environments react with the plasmalogen’s sensitive vinyl ether moiety to create a lipid signal, a lysoglycoglycerolipid that upregulates the inflammatory cytokines TNF-α and IL-6 through a TLR receptor. This provides a molecular mechanism that allows E. lenta to upregulate inflammatory responses in a cell- and antigen-independent fashion. This molecular mechanism is similar to an endogenous signaling system that upregulates RORγt through a triggered mammalian plasmalogen signal, 1–18:0-lysophosphatidylethanolamine.
pubs.acs.org
In our latest collab w/the Clardy Lab
@HarvardMed to mine microbial metabolites for immunomodulators, we identified how Eggerthella lent—one of the most studied & least understood members of the human gut microbiome—upregulates inflammatory responses in a cell- & antigen- independent fashion. (1/2)
...and maps expression of genetic risk variants onto intestinal biogeography. Read the results of this exciting collaboration!

@broadinstitute.org @mgbresearch.bsky.social @genelayinstitute.bsky.social
(5/6) This suggests that OMV-like nanoparticles could one day be used to deliver vaccines or therapeutics to immune cells! We’re thrilled to have this paper out in the world. Congratulations to co-first authors Eric Brown and Emily Temple on this important work!
(4/6) These findings are exciting for a few reasons. Not only do they clarify the mechanism of a microbiome-host interaction that is important in inflammatory disease, they add to the mounting evidence that OMVs can be an effective vehicle for immunomodulatory signaling.
(3/6) We found that OMVs secreted by Bacteroides deliver sphingolipids into host immune cells, activating mevalonate (cholesterol biosynthesis) pathway genes and increasing anti-inflammatory IL-10 secretion. The IL-10 response is dependent upon the mevalonate pathway activation.
(2/6) Bacteroides species are ubiquitous in the human gut microbiome. Unlike most bacteria, their membranes contain sphingolipids (SLs), whose abundance in the gut negatively correlates with inflammation. We wanted to understand the role of SLs in microbiome-host interactions.
(1/6) Our latest paper in ‪@cp-cellhostmicrobe.bsky.social‬ shows that sphingolipids in Bacteroides outer membrane vesicles (OMVs) induce a tolerogenic host cell response through the cholesterol biosynthesis pathway.
www.cell.com/cell-host-mi...
https://www.cell.com/cell-host-microbe/fulltext/S1931-3128(25)00186-6‬
Reposted
labwaggoner.bsky.social
Bacterial sphingolipids delivered by outer membrane vesicles persist within mammalian immune cells and promote IL-10 secretion via the mevalonate pathway
www.cell.com/cell-host-mi...
@thexavierlab.bsky.social @cp-cellhostmicrobe.bsky.social