Iker Irisarri
banner
ikeririsarri.bsky.social
Iker Irisarri
@ikeririsarri.bsky.social
Digging genomes🔬to travel back in time 🦖 #Evolution #Phylogenomics #MajorTransitions Ramón y Cajal Researcher at MNCN-CSIC, Madrid
Join us for the first PCI Genomics Recommenders' Meeting happening on Feb 9th and 11th!
All Recommenders are invited to the PCI Genomics Recommenders’ Meeting! We will present our goals and discuss possible ways to improve user experience and engagement. Two online meetings: Feb 9th, 18h CET OR Feb 11th, 15h CET. If not a Recommender yet, send us an email!
February 7, 2026 at 5:02 PM
Reposted by Iker Irisarri
New paper on @biorxiv-evobio.bsky.social: Are interphylum spiralian relationships resolvable? doi.org/10.64898/202...

@maxjtelford.bsky.social and I tried answering this question with two independent phylogenomic datasets.

(1/7) 🧪
Are interphylum spiralian relationships resolvable?
The phyla making up the major animal clade of Spiralia have been clear since the advent of molecular phylogenetics; the relationships between these spiralian phyla have not. The lack of consensus over the relationships between these important animal phyla might be a clue implying their emergence in an explosive radiation. Focusing on the five largest spiralian phyla (Annelida, Brachiopoda, Mollusca, Nemertea and Platyhelminthes) and using two phylogenomic datasets, we have applied site-bootstrapping and taxon-jackknifing to explore this example of taxonomic instability. Analyses on the 105 possible rooted trees relating them showed that interphylum branches are very short. Preference for rooting Spiralia on Platyhelminthes is a long-branch artefact. Most analyses on the 15 unrooted trees showed a preference for the same topology but the support over other solutions was non significant. We conclude that the spiralian phyla emerged in rapid succession resulting in a difficult to resolve radiation. The deep history we infer for Spiralia has wide ranging implications for our interpretation of Cambrian fossils and for the evolution of traits such as biomineralization, segmentation and larvae. Impact Statement Analyses of two independent phylogenomic datasets suggest an explosive radiation at the origin of Spiralia, with implications for understanding the group’s evolutionary history. ### Competing Interest Statement The authors have declared no competing interest.
doi.org
February 2, 2026 at 5:03 PM
Reposted by Iker Irisarri
I am looking for a PhD working on tracking trait changes in insects/spiders at the Leibniz Institute for the Analysis of Biodiversity change @leibnizlib.bsky.social and the University of Hamburg.
Apply here: www.uni-hamburg.de/en/stellenan...
Job advertisement
www.uni-hamburg.de
February 3, 2026 at 8:42 AM
Reposted by Iker Irisarri
Interested in insects, spiders and trait-based biodiversity research? This PhD project at LIB and the University of Hamburg might be for you — or someone you know!
I am looking for a PhD working on tracking trait changes in insects/spiders at the Leibniz Institute for the Analysis of Biodiversity change @leibnizlib.bsky.social and the University of Hamburg.
Apply here: www.uni-hamburg.de/en/stellenan...
Job advertisement
www.uni-hamburg.de
February 3, 2026 at 10:30 AM
Reposted by Iker Irisarri
Proponen descodificar el ADN de los especímenes tipo, los ejemplares que definen cada especie, para potenciar la investigación de la biodiversidad. Un equipo internacional con participación del MNCN publica la iniciativa en Systematic Biology. @leibnizlib.bsky.social www.mncn.csic.es/es/Comunicac...
January 12, 2026 at 12:39 PM
Reposted by Iker Irisarri
¡Impulsamos la digitalización de la #biodiversidad! En diciembre el [email protected] organizó un workshop europeo avanzado de #Specify, el sistema de gestión líder para colecciones científicas. mncn.csic.es
January 5, 2026 at 12:35 PM
Reposted by Iker Irisarri
Kulikov, @ikeririsarri.bsky.social @fonamental.bsky.social et al present a 529.6 Mb chromosome-scale genome for the redlip blenny (scaffold N50 = 23.7 Mb; BUSCO = 97.06%). Annotation identified 18,927 protein-coding genes.

🔗 doi.org/10.1093/gbe/evaf242

📸 Evan D’Alessandro

#genome #evolution
January 5, 2026 at 3:40 PM
Reposted by Iker Irisarri
Microbial eukaryotes keep challenging assumptions about eukaryotic cell and genome biology.

Our upcoming workshop explores the frontier of protist genomics and how it shapes cell biology, ecology and evolution.

Please save the date! Talks, posters and ECR events

Websites and details coming soon
December 13, 2025 at 10:19 AM
A new combtooth blenny genome just dropped! Assembled from recycled ONT data + HiC + RNAseq.

Thanks, Nikita Kulikov, Kim Joffroy, @ambonacolta.bsky.social @delcampolab.bsky.social for your hard work
The chromosome-scale genome assembly of the redlip blenny, Ophioblennius macclurei (Blenniidae)
Abstract. Here, we present a high-quality, chromosome-scale genome assembly for the redlip blenny Ophioblennius macclurei (family Blennidae). The assembly
academic.oup.com
December 12, 2025 at 9:32 AM
Reposted by Iker Irisarri
Wow! Remarkably complete story on the logic of phenotypic plasticity in a predatory protist - congrats @cellraiser.bsky.social et al!
How do cells adapt morphology to function? In a 🔥 preprint by @zjmaggiexu.bsky.social , with @dudinlab.bsky.social and @amyweeks.bsky.social , we identify a self-organizing single-cell morphology circuit that optimizes the feeding trap structure of the suctorian P. collini. 🧵 tinyurl.com/4k8nv926
November 18, 2025 at 8:52 PM
Reposted by Iker Irisarri
Del 4 al 16 de noviembre se celebra la semana de la ciencia (si, son dos semanas aunque por el nombre parezca una)

Tienes toda la información en el enlace pero yo te recomiendo especialmente el homenaje a Jane Goodall que tendremos el jueves 12

mncn.csic.es/es/Comunicac...
El MNCN presenta su propuesta de actividades para la Semana de la Ciencia | Museo Nacional de Ciencias Naturales
Habrá un homenaje a Jane Goodall en el que Rebeca Atencia, considerada su sucesora, hablará de su experiencia con la primatóloga
mncn.csic.es
October 24, 2025 at 1:18 PM
Reposted by Iker Irisarri
This has been great: #Phylogenomics unveil a recent origin of morphological complexity in Coleochaetophyceae. With @ikeririsarri.bsky.social @maaikebier.bsky.social Chuck, + more @uni-goettingen.de @watertoland.bsky.social #streptophytes #charophytes #evolution
www.sciencedirect.com/science/arti...
September 18, 2025 at 1:14 PM
Complex thalli in streptophyte algae of the class Coleochaetophyceae are evolutionarily younger than expected :-D 🌱
Phylogenomics unveil a recent origin of morphological complexity in Coleochaetophyceae
Land plants (embryophytes) are the morphologically most elaborate photosynthetic eukaryotes. The evolutionary origin of many of their key morphogeneti…
www.sciencedirect.com
September 17, 2025 at 5:33 PM
Reposted by Iker Irisarri
PhD opportunity in Bodø! You’ll sequence genomes from invasive and non-invasive slug (A. vulgaris) populations to uncover the molecular basis of invasion dynamics. Supervised by Prof. Les Noble & co-supervisor by me. Fully funded, cutting-edge science, great team. Apply by Sept 21: shorturl.at/zJT06
shorturl.at
September 8, 2025 at 9:12 AM
Reposted by Iker Irisarri
What you're looking at is a brand new protist species! 🤯🔬
Isn't it beautiful?
This image is just a glimpse of what's to come. We can't wait to share our full findings soon, in partnership with Guifré @beaplab.bsky.social @luisjagago.bsky.social. Stay tuned! #NewSpecies #protistsonSky #diversity
September 9, 2025 at 4:21 PM
Reposted by Iker Irisarri
The Leibniz Institute for Biodiversity Change is hiring a tenure-track Scientist in molecular biodiversity research in Hamburg. Apply by Sept 30, 2025. More info: https://8101202752.karriereportal.cloud/job/2025-14-Scientist-in-molecular-biodiversity-research-(m_f_d) #job
Karriereportal
Karriereportal
8101202752.karriereportal.cloud
September 6, 2025 at 6:16 AM
Reposted by Iker Irisarri
We reviewed the use of long-read sequencing with both @nanoporetech.com and @pacbio.bsky.social data for analyses of eukaryote #biodiversity for environmental samples #eDNA and #barcoding, providing a complete guide for future applications #BiodiversityGenomics @sgn.one
doi.org/10.32942/X2J...
Long-read sequencing for biodiversity analyses - a comprehensive guide
doi.org/10.32942/X2J...
August 27, 2025 at 11:55 AM
Reposted by Iker Irisarri
The @scilifelab.se ancient DNA unit is looking for an bioinformatician placed at Uppsala University. This is a great way to be part of diverse #aDNA research projects as a staff scientist with permanent (!!) employment:

www.uu.se/en/about-uu/...
Bioinformatician - Uppsala University
Bioinformatician, Department of Organismal Biology, Uppsala University
www.uu.se
August 12, 2025 at 7:10 AM
Reposted by Iker Irisarri
Join us 15/09/2025 @mncn-csic.bsky.social for a symposium on various applications of #genomics to #biodiversity research

Registration required for in-person participation (www.eventbrite.co.uk/e/museum-bio...); streamed through YouTube.

Thanks to generous support by Conexión Genoma @csic.es
July 18, 2025 at 10:00 AM
Reposted by Iker Irisarri
🌡️ A new Science paper reports 2023 saw record‐breaking #ΜarineΗeatwaves — 96% of the oceans were affected, heatwaves lasted 4× longer than average, and some regions stayed hot for over 500 days. It may mark a climate #TippingPoint.

#MarineEcology #Conservation 🌍🌐🧪🌊
www.science.org/doi/full/10....
July 27, 2025 at 6:52 AM
Reposted by Iker Irisarri
📑 New @genomics.peercommunityin.org recommendation, by @sishuowang.bsky.social
genomics.peercommunityin.org/articles/rec...

On the work of David Robelin et al. (2025) localScore: an R package to highlight optimal and suboptimal segment in a sequence with associated p-values computation

#OpenAccess
July 19, 2025 at 8:00 AM
Join us 15/09/2025 @mncn-csic.bsky.social for a symposium on various applications of #genomics to #biodiversity research

Registration required for in-person participation (www.eventbrite.co.uk/e/museum-bio...); streamed through YouTube.

Thanks to generous support by Conexión Genoma @csic.es
July 18, 2025 at 10:00 AM
Reposted by Iker Irisarri
Fresh off the presses in @currentbiology.bsky.social : Is the deuterostome clade an artefact? www.sciencedirect.com/science/arti...

We (yours truly, Paschalis Natsidis, Laura Piovani and co-leads Paschalia Kapli and @maxjtelford.bsky.social) set out to try to answer this question.

Why? (1/12)
Is the deuterostome clade an artifact?
There is a long-standing consensus that the animal phyla closest to our own phylum of Chordata are the Echinodermata and Hemichordata. These three phy…
www.sciencedirect.com
July 14, 2025 at 12:40 PM
Reposted by Iker Irisarri
This month's ERGA BioGenome Analysis & Applications Seminar will feature a talk by speaker Pío Sierra about a new tool, pantera, which allows faster identification of Transposable Elements in genome assemblies. www.erga-biodiversity.eu/post/faster-...
Faster identification of Transposable Elements in full genome assemblies
This month's ERGA BioGenome Analysis & Applications Seminar will feature a talk by speaker Pío Sierra about a new tool, pantera, which allows faster identification of Transposable Elements in genome a...
www.erga-biodiversity.eu
July 4, 2025 at 6:35 AM
Reposted by Iker Irisarri
Happy pride🏳️‍🌈🏳️‍⚧️!!!!
@mncn-csic.bsky.social
June 28, 2025 at 4:51 PM