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Nature Microbiology
@natmicrobiol.nature.com
Nature Microbiology publishes the latest research and commentary in all areas of microbiology.

https://www.nature.com/nmicrobiol/
Pinned
Nature Microbiology turns 10! 🎂

As a special treat, we take you back to the editorial team that started it all and then fast forward to take a peek into the future of microbiology through some brilliant microbiologists.

#MicroSky 🦠

www.nature.com/nmicrobiol/v...
Reposted by Nature Microbiology
Hot off the press and very interesting: Hsu, Schnabl et al. reveal how gut bacteria contribute to (not kidding) auto-brewery syndrome (ABS). Patients become intoxicated without drinking alcohol. Their gut microbiota ferments carbohydrates into ethanol. Which microbes are responsible? ⬇️

1/3
January 12, 2026 at 1:56 PM
Reposted by Nature Microbiology
I've written a highlight article for @natmicrobiol.nature.com on their new publication from the Ding lab that showed the healing potential of commensal #fungi. Important work started in mice with possible health benefits for humans. Read more here:
rdcu.be/eYFyy
#immunosky #microsky 🧪🍄
Client Challenge
rdcu.be
January 12, 2026 at 12:26 PM
Reposted by Nature Microbiology
@carmen-aguilar.bsky.social and her team have, for the first time, uncovered how E. coli bacteria sneak into the prostate. New paper out in @natmicrobiol.nature.com
The secret route of prostate infections
A research team at the University of Würzburg has, for the first time, uncovered how E. coli bacteria sneak into the prostate. The discovery opens the door to potential new treatments for bacterial pr...
www.uni-wuerzburg.de
January 12, 2026 at 10:29 AM
Reposted by Nature Microbiology
🔊 We have published our first articles! 🎉

👉 Explore our content at www.nature.com/commssustain/
Communications Sustainability
Communications Sustainability is an open-access journal from Nature Portfolio that publishes high-quality research, reviews and commentary in all ...
www.nature.com
January 8, 2026 at 2:03 PM
#NewResearch

Uropathogenic E. coli (UPEC) can cause bacterial prostatitis, a prevalent and recurrent infection with high morbidity in men. Here they show that UPEC invades luminal prostate cells via a bacterial FimH and host PPAP receptor interaction

#microsky

www.nature.com/articles/s41...
January 9, 2026 at 11:29 AM
#NewResearch

Gut microbes can produce ethanol and contribute to auto-brewery syndrome. FMT can potentially treat individuals with this syndrome and improve symptoms.

#microsky

www.nature.com/articles/s41...
January 9, 2026 at 11:23 AM
#NewResearch

Infecting phages co-opt a bacterial protein to potentially faciliate genome degradation of competing phages

#microsky

www.nature.com/articles/s41...
January 9, 2026 at 11:18 AM
New Review!

Sang Yup Lee, Bernhard Palsson & Gi Bae Kim discuss how #AI can aid microbial gene function discovery

www.nature.com/articles/s41...

#microsky
January 9, 2026 at 11:13 AM
New Microbe Matters!

@relenski.bsky.social traces the legacy of Escherichia coli and how science is evolving to use this model organism in new ways

#microsky

www.nature.com/articles/s41...
January 9, 2026 at 11:09 AM
New Perspective!

Navigating the duality of Akkermansia muciniphila

by Erica Grant, Elena Monzel & Mahesh Desai

#microsky #microbiomesky

www.nature.com/articles/s41...
January 9, 2026 at 11:07 AM
Reposted by Nature Microbiology
How can we tell whether an antibiotic eradicates an infection? Researchers from the @biomedizin.unibas.ch, at the @unibas.ch, present an antimicrobial single-cell microscopy-based method that measures antibiotic lethality in individual bacteria.

🔗 doi.org/10.1038/s415...

@natmicrobiol.nature.com
January 9, 2026 at 10:54 AM
Reposted by Nature Microbiology
Two fantastic papers published back-to-back in @natmicrobiol.nature.com show that strictly lytic phages can persist intracellularly for long periods of time. Very much in line with ideas we had suggested in a recent study. Highly recommended reads 👇
www.nature.com/articles/s41...
January 9, 2026 at 9:50 AM
Reposted by Nature Microbiology
Our first paper is out today in @natmicrobiol.nature.com!

We introduce a prostate organoid model and show that UPEC invades prostate cells via FimH binding to the prostate-specific protein PAPP. A step toward targeted therapies against bacterial prostatitis. 🎉

#UTI #UPEC #Organoids #AMR
Uropathogenic Escherichia coli invade luminal prostate cells via FimH–PPAP receptor binding - Nature Microbiology
Uropathogenic Escherichia coli infection of a murine prostate organoid model reveals a bacterial FimH–host prostatic acid phosphatase adhesin-receptor interaction enabling invasion and replication wit...
www.nature.com
January 8, 2026 at 11:12 AM
Nature Microbiology turns 10! 🎂

As a special treat, we take you back to the editorial team that started it all and then fast forward to take a peek into the future of microbiology through some brilliant microbiologists.

#MicroSky 🦠

www.nature.com/nmicrobiol/v...
January 5, 2026 at 4:44 PM
Reposted by Nature Microbiology
Precious Matsoso, a public-health official based in Pretoria, South Africa, brokered the world’s first pandemic-preparedness treaty after years of hard-fought negotiations. She’s part of Nature’s 10 for 2025. 🧪
The first global pandemic treaty — and the woman who made it happen
Precious Matsoso is part of Nature’s 10, a list of people who shaped science in 2025.
go.nature.com
January 2, 2026 at 2:36 PM
#NewResearch

While oral bacteria rarely colonize the healthy gut, they dominate the gut microbiome of patients with chronic liver disease. Here a bacterial gene encoded by microbial translocators is linked to gut barrier disruption and fibrosis

#MicroSky 🦠

www.nature.com/articles/s41...
Microbial collagenase activity is linked to oral–gut translocation in advanced chronic liver disease - Nature Microbiology
While oral bacteria rarely colonize the healthy gut, they dominate the gut microbiome of patients with chronic liver disease. Here a bacterial gene encoded by microbial translocators is linked to gut ...
www.nature.com
January 2, 2026 at 2:07 PM
#NewResearch

Diverse genomes of lytic phages are found in bacterial assemblies, challenging assumptions about the nature of the lytic lifestyle.

#MicroSky 🦠

www.nature.com/articles/s41...
Large-scale analysis of bacterial genomes reveals thousands of lytic phages - Nature Microbiology
Diverse genomes of lytic phages are found in bacterial assemblies, challenging assumptions about the nature of the lytic lifestyle.
www.nature.com
January 2, 2026 at 2:06 PM
#NewResearch

The long-term existence of diverse virulent phages within cultures of Escherichia coli and others challenges the virulent–temperate dichotomy and points to non-canonical phage lifestyles.

#MicroSky 🦠 @peterdoug.bsky.social @emggroupucph.bsky.social

www.nature.com/articles/s41...
Persistent virulent phages exist across bacterial isolates - Nature Microbiology
The long-term existence of diverse virulent phages within cultures of Escherichia coli and others challenges the virulent–temperate dichotomy and points to non-canonical phage lifestyles.
www.nature.com
January 2, 2026 at 2:05 PM
A big thanks to all the authors, reviewers, and readers of Nature Microbiology for their love and support throughout the year.

We are on a break & will be back on Jan 2nd, in what will be a very special year for us!

In the meantime, enjoy a collage made by @francoismayer.bsky.social

#MicroSky 🦠
December 19, 2025 at 8:46 PM
Reposted by Nature Microbiology
My article on aeonophiles (ultra-long lived organisms) came out in Aeon Magazine today!
December 18, 2025 at 11:19 PM
Reposted by Nature Microbiology
"The changing roles of Escherichia coli" -- a short essay by yours truly.

rdcu.be/eVtXT
The changing roles of Escherichia coli
Nature Microbiology - Richard Lenski traces the legacy of Escherichia coli and how science is evolving to use this model organism in new ways.
rdcu.be
December 19, 2025 at 1:57 PM
Oh well, we had to stop adding more papers at one point because the computer memory wasn't able to handle a thread that long!

We would like to hear from our readers about their favourite papers! Do add them in replies.

#MicroSky 🦠
As the year ends, we decided to select our favorite papers of 2025

Turns out, it is impossible as we love them all!

So, we picked 'some' that exhibit the range of microbiology highlighted through the columns of Nature Microbiology.

Here is a glimpse into #EditorPicks of 2025

#MicroSky 🦠
December 19, 2025 at 3:05 PM
As the year ends, we decided to select our favorite papers of 2025

Turns out, it is impossible as we love them all!

So, we picked 'some' that exhibit the range of microbiology highlighted through the columns of Nature Microbiology.

Here is a glimpse into #EditorPicks of 2025

#MicroSky 🦠
December 19, 2025 at 3:03 PM
What is better than one? Two connected papers!

#NewResearch

S protein of Streptococcus pneumoniae activates PBP1a and coordinates with a wider GpsB-associated multi-protein complex to regulate peptidoglycan remodelling and cell division.

#MicroSky 🦠

www.nature.com/articles/s41...
December 19, 2025 at 2:06 PM
#NewResearch

S protein from Streptococcus pneumoniae activates cell wall repair and modification to promote virulence against in vivo antimicrobial pressures including lysozyme and LL-37 @veeninglab.com

#MicroSky 🦠

www.nature.com/articles/s41...
Pneumococcal S protein coordinates cell wall modification and repair to resist host antimicrobials - Nature Microbiology
Streptococcal S protein activates a peptidoglycan cell wall repair and modification complex to promote resistance of Streptococcus pneumoniae to lysozyme and LL-37, and increase virulence during infec...
www.nature.com
December 19, 2025 at 2:05 PM