ActinoBase
@actinobase.bsky.social
840 followers
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33 posts
Streptomyces biology and natural products. Visit the wiki at: http://actinobase.org for help and protocols. Visit http://streptomyces.org.uk for genomes, strains and plasmids. Email matt.hutchings [at] jic.ac.uk to get involved. #microsky
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ActinoBase
@actinobase.bsky.social
· Nov 20
Reposted by ActinoBase
Reposted by ActinoBase
Matt Hutchings
@matthutchings.bsky.social
· Aug 20
ActinoBase
@actinobase.bsky.social
· Aug 16
A precisely regulated Streptomyces expression system pTZYp facilitated by the strong promoter stnY and cmt operon - Biotechnology Letters
One of the characteristics of actinomycetes, especially streptomycetes, is the high GC content in their genome, which often leads to the failure of heterologous expression in E. coli, and thus hinders...
link.springer.com
Reposted by ActinoBase
Reposted by ActinoBase
Gerry Wright
@gdwantibiotics.bsky.social
· Aug 12
Coniontins, lipopetaibiotics active against Candida auris identified from a microbial natural product fractionation library
Nature Communications - In this work, authors utilise a prefractionation natural product extract screening platform, which uncovers coniotins, lipopeptaibiotics with broad antifungal activity and a...
rdcu.be
Reposted by ActinoBase
Reposted by ActinoBase
Reposted by ActinoBase
Susan Schlimpert
@s-lab.bsky.social
· Jul 10
Independent Fellowship in Plant-Associated Microbial Interactions | John Innes Centre
An exciting opportunity for an Independent Fellowship in Plant-Associated Microbial Interactions has arisen at the John Innes Centre. To read the full job description for this role…
www.jic.ac.uk
Reposted by ActinoBase
Reposted by ActinoBase
Reposted by ActinoBase
Susan Schlimpert
@s-lab.bsky.social
· Jul 9
Function and firing of the Streptomyces coelicolor contractile injection system requires the membrane protein CisA
CryoEM, genetic, and cell biological analyses reveal that the conserved membrane protein CisA mediates membrane recruitment of contractile injection systems Streptomyces coelicolor, enabling their act...
elifesciences.org
Reposted by ActinoBase
Thom Booth
@thombooth.bsky.social
· Jul 9
Evidence supporting the first secondary chromosome in actinobacteria as a hallmark of the Embleya genus
Embleya is a genus within the family Streptomycetaceae, a group of actinobacteria with outstanding capacity for production of specialised metabolites and a strikingly complex life cycle. In this work, we sequenced the complete genome of the new species Embleya australiensis MST-11070 and validated the assembly using optical mapping. The genome of E. australiensis MST-11070 consists of a 7.1 Mb linear chromosome and three additional replicons, including a 4.2 Mb linear replicon, EEC1, significantly larger than all previously described secondary replicons from bacteria. EEC1 is typified by its similar composition to the chromosome in terms of GC-content, codon usage and gene functions. It also carries terminal inverted repeats identical to the chromosome. EEC1 is enriched in biosynthetic gene clusters (BGCs), including the only copy of the BGCs for the spore pigment and the surfactant peptide SapB, metabolites essential for the organism's lifecycle. EEC1 contains an origin of replication with at least some chromosomal properties, and its replication is likely to depend on functions provided by chromosomally located genes. Further comparison of Embleya spp. genomes suggests that EEC1-like replicons are conserved across the genus, in contrast to other known large linear extrachromosomal replicons (megaplasmids) in the order. EEC1 is thus a hallmark of the Embleya genus and is central to its evolution within the Streptomycetaceae family. We propose EEC1 as a secondary chromosome, distinct from previously described secondary chromosomes that utilise plasmid-like replication mechanisms (chromids) and the largest secondary replicon reported in bacteria, to date. ### Competing Interest Statement Ernest Lacey is a Founder, Board Member, and the Managing Director of Microbial Screening Technology Pty. Ltd. The authors declare no competing financial interests. Biotechnology and Biological Sciences Research Council, https://ror.org/00cwqg982, BB/P021506/1, BBS/E/J/000PR9790, BB/X01097X/1, BB/M011216/1 Novo Nordisk Foundation, https://ror.org/04txyc737, NNF22OC0078997
www.biorxiv.org
Reposted by ActinoBase
Reposted by ActinoBase
Reposted by ActinoBase
Matt Hutchings
@matthutchings.bsky.social
· Jun 12
Pearl Necklaces, Molds, Asthma, and a Discovery of the Century (Penicillin)
Theodor Billroth (1829–1894) is best known as the inventor of subtotal gastrectomies (removal of parts of the stomach), known as Billroth I and II, which are still performed today. Billroth̵...
link.springer.com
Reposted by ActinoBase