German Lagunas-Robles
@g-lagunasrobles.bsky.social
140 followers 220 following 17 posts
postdoc @ IU Bloomington (Bracewell Lab) genome evolution, ants, and beetles 🧬🐜🪲
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g-lagunasrobles.bsky.social
ggplot2 ethusiasts, new update just dropped! 🔥🔥🔥
thomasp85.com
I am beyond excited to announce that ggplot2 4.0.0 has just landed on CRAN.

It's not every day we have a new major #ggplot2 release but it is a fitting 18 year birthday present for the package.

Get an overview of the release in this blog post and be on the lookout for more in-depth posts #rstats
ggplot2 4.0.0
A new major version of ggplot2 has been released on CRAN. Find out what is new here.
www.tidyverse.org
Reposted by German Lagunas-Robles
thomasp85.com
I am beyond excited to announce that ggplot2 4.0.0 has just landed on CRAN.

It's not every day we have a new major #ggplot2 release but it is a fitting 18 year birthday present for the package.

Get an overview of the release in this blog post and be on the lookout for more in-depth posts #rstats
ggplot2 4.0.0
A new major version of ggplot2 has been released on CRAN. Find out what is new here.
www.tidyverse.org
Reposted by German Lagunas-Robles
g-lagunasrobles.bsky.social
Check out our latest preprint in Formica ants! We investigate how the sex ratio supergene evolved. We find that a colony-level sex ratio supergene evolved twice! This likely occurred as a result of recombination between the the ancestral queen number supergenes present in Formica. 🧬🐜🧬🐜🧬🐜
g-lagunasrobles.bsky.social
Led by Jessica Purcell. The team included @giuliascarparo.bsky.social , Madison Sankovitz, Mari West, Zul Alam, and Alan Brelsford.
g-lagunasrobles.bsky.social
There were ~10% of colonies showing mismatches between supergene genotype and phenotype, but we only observed this at one site. This raised the possibility that environment may override supergene control of colony queen number.
g-lagunasrobles.bsky.social
Colonies with single queens were more common in the north, but the queen number polymorphism was present throughout the gradient. The supergene haplotype frequency reflected this as the frequency also varied with latitude.
g-lagunasrobles.bsky.social
We sampled Formica podzolica colonies across a latitudinal gradient between Alaska and New Mexico. Surprisingly, Formica podzolica has SIX(!) common supergene variants that are differentiated by three distinct cassettes.
Reposted by German Lagunas-Robles
judithmank.bsky.social
Very pleased to see this officially out - Genome Architecture and Speciation in Plants and Animals. With @siluwang.bsky.social, @dortizba.bsky.social and Loren Rieseberg. onlinelibrary.wiley.com/doi/10.1111/...
onlinelibrary.wiley.com
g-lagunasrobles.bsky.social
Thanks to Zul Alam and Alan Brelsford for their work on this! (4/n)
g-lagunasrobles.bsky.social
Taken together, these results suggest that supercoloniality isn't as simple as having the multi-queen supergene haplotype. (3/n)
g-lagunasrobles.bsky.social
We find that the multi-queen haplotype is missing from a supercolonial population. Additionally, we find a similar pattern with the multi-queen haplotype being absent in one supercolonial species, but present in another. (2/n)
g-lagunasrobles.bsky.social
Is supercoloniality a simple extension of polygyny?Supercolonies, networks of interconnected nests with many queens, have been proposed as a natural extension of multi-queen nests. In many Formica ants, a supergene determines whether a colony has a single queen or many queens. (1/n)
g-lagunasrobles.bsky.social
Thanks to Zul Alam and Alan Brelsford for their work on this! (4/n)
g-lagunasrobles.bsky.social
Taken together, these results suggest that supercoloniality isn't as simple as having the multi-queen supergene haplotype. (3/n)
g-lagunasrobles.bsky.social
We find that the multi-queen haplotype is missing from a supercolonial population. Additionally, we find a similar pattern with the multi-queen haplotype being absent in one supercolonial species, but present in another. (2/n)
Reposted by German Lagunas-Robles
biorxiv-evobio.bsky.social
A novel supergene controls queen size and colony social organization in the ant Myrmica ruginodis https://www.biorxiv.org/content/10.1101/2025.03.24.644106v1
Reposted by German Lagunas-Robles
plosbiology.org
Dynamics of a supergene. A study of the BC supergene in wing color morphs of the African monarch #butterfly by @rishidekayne.bsky.social &co reveals dynamic evolution of #supergene haplotypes, fueled by incomplete recombination suppression 🧪 @plosbiology.org plos.io/3DiFhnL
Top: Topology weightings across chr15 showing how the karamu haplotype is related to the klugii and orientis haplotypes. Upper panel shows three possible rooted genealogical topologies. Second panel shows weights for each topology along the chromosome, smoothed with a 20 kb span. Arrows above the plot indicate the locations of inversions. Third panel shows unsmoothed topology weightings across a 1.5 Mb region corresponding to Inversion 2. Bottom: Ancestry painting across a 100 kb region within Inversion 2, showing ancestry tracts for two homozygous karamu individuals compared to two representative individuals homozygous for the orientis and klugii haplotypes. Coding regions are indicated below the plot, with the candidate gene for background colouration yellow indicated. Green triangles represent the top 10 SNPs for background colour in our GWAS. There is evidence for recombination throughout the supergene region, and specifically in the vicinity of yellow, consistent with the hypothesis that orientis ancestry at this locus (i.e., the B allele) is associated with darker colouration in karamu individuals.
Reposted by German Lagunas-Robles
helsenjana.bsky.social
Centromere evolution isn't a sudden switch!

Our study shows centromere transitions are a step-by-step process driven by a combination of drift and selection. Discover how the kinetochore interface shapes this gradual change in our new preprint 🥳 doi.org/10.1101/2025.01.16.633479 🧵(1/8)
Reposted by German Lagunas-Robles
davetoews.bsky.social
🦉🧪 Questions about high latitude myrtle warblers have been "up in the air" (pun intended) since 1899! @stephszarmach.bsky.social used fancy new geolocators that track light AND barometric pressure to add an unexpected chapter to this tale ......
stephszarmach.bsky.social
Excited to share our preprint on the migration of high-latitude breeding myrtle warblers! Using barometric geolocators and stable isotopes we found most birds migrated >5,000km to the Gulf Coast rather than to the closer Pacific Coast wintering area.

biorxiv.org/cgi/content/...
Left panel shows a myrtle warbler wearing a geolocator backpack and right panel shows a map with a migration track for one bird traveling from Alaska southeast across Canada and then southwest to Texas
g-lagunasrobles.bsky.social
Thanks to Zul Alam and Alan Brelsford who contributed to this work! (and are not on Bluesky)
g-lagunasrobles.bsky.social
Our preprint on the unexpected absence of a multiple-queen supergene haplotype in supercolonial populations is up on bioRxiv! We found that the P haplotype is not necessary for supercoloniality in the Formica rufa group, despite its longstanding association with non-supercolonial polygyny.