CrowDsourcing COndensate Database & Encyclopedia
@cdcode.bsky.social
CD-CODE is a comprehensive, manually-curated database for biomolecular condensates and proteins developed by Agnes Toth-Petroczy lab @tothpetroczylab.bsky.social @mpi-cbg.de
https://cd-code.org
https://cd-code.org
Pinned
CD-CODE 2.0 is now published in @narjournal.bsky.social 🤩
CD-CODE 2.0 stores #biomolecular #condensates and their #protein and nucleic acid components and now includes repository of 🦠 infectious condensates, 💊 condensate-modulating compounds, and 🩺 condensatopathies
👀 doi.org/10.1093/nar/...
CD-CODE 2.0 stores #biomolecular #condensates and their #protein and nucleic acid components and now includes repository of 🦠 infectious condensates, 💊 condensate-modulating compounds, and 🩺 condensatopathies
👀 doi.org/10.1093/nar/...
Reposted by CrowDsourcing COndensate Database & Encyclopedia
Our enhanced knowledge base for condensates is online @narjournal.bsky.social! Congratulations to the first authors @kkuznetsova.bsky.social and @mscheremetjew.bsky.social and all co-authors & curators! What a wonderful team effort to advance condensate research! 🤩 @mpi-cbg.de @hymanlab.bsky.social
CD-CODE 2.0 is now published in @narjournal.bsky.social 🤩
CD-CODE 2.0 stores #biomolecular #condensates and their #protein and nucleic acid components and now includes repository of 🦠 infectious condensates, 💊 condensate-modulating compounds, and 🩺 condensatopathies
👀 doi.org/10.1093/nar/...
CD-CODE 2.0 stores #biomolecular #condensates and their #protein and nucleic acid components and now includes repository of 🦠 infectious condensates, 💊 condensate-modulating compounds, and 🩺 condensatopathies
👀 doi.org/10.1093/nar/...
November 17, 2025 at 9:31 PM
Our enhanced knowledge base for condensates is online @narjournal.bsky.social! Congratulations to the first authors @kkuznetsova.bsky.social and @mscheremetjew.bsky.social and all co-authors & curators! What a wonderful team effort to advance condensate research! 🤩 @mpi-cbg.de @hymanlab.bsky.social
CD-CODE 2.0 is now published in @narjournal.bsky.social 🤩
CD-CODE 2.0 stores #biomolecular #condensates and their #protein and nucleic acid components and now includes repository of 🦠 infectious condensates, 💊 condensate-modulating compounds, and 🩺 condensatopathies
👀 doi.org/10.1093/nar/...
CD-CODE 2.0 stores #biomolecular #condensates and their #protein and nucleic acid components and now includes repository of 🦠 infectious condensates, 💊 condensate-modulating compounds, and 🩺 condensatopathies
👀 doi.org/10.1093/nar/...
November 14, 2025 at 1:20 PM
CD-CODE 2.0 is now published in @narjournal.bsky.social 🤩
CD-CODE 2.0 stores #biomolecular #condensates and their #protein and nucleic acid components and now includes repository of 🦠 infectious condensates, 💊 condensate-modulating compounds, and 🩺 condensatopathies
👀 doi.org/10.1093/nar/...
CD-CODE 2.0 stores #biomolecular #condensates and their #protein and nucleic acid components and now includes repository of 🦠 infectious condensates, 💊 condensate-modulating compounds, and 🩺 condensatopathies
👀 doi.org/10.1093/nar/...
☀️summer is here -
and so is CD-CODE v1.10 release!🤩
💡CD-CODE has now 719 manually curated #condensates (and ~40% are #human associated!)
💡Check out new #condensates and updated #protein - condensate connections at cd-code.org
#Bioinformatics #DatabaseUpdate #IDR #RNP #RBP #cdcode
and so is CD-CODE v1.10 release!🤩
💡CD-CODE has now 719 manually curated #condensates (and ~40% are #human associated!)
💡Check out new #condensates and updated #protein - condensate connections at cd-code.org
#Bioinformatics #DatabaseUpdate #IDR #RNP #RBP #cdcode
June 11, 2025 at 1:33 PM
☀️summer is here -
and so is CD-CODE v1.10 release!🤩
💡CD-CODE has now 719 manually curated #condensates (and ~40% are #human associated!)
💡Check out new #condensates and updated #protein - condensate connections at cd-code.org
#Bioinformatics #DatabaseUpdate #IDR #RNP #RBP #cdcode
and so is CD-CODE v1.10 release!🤩
💡CD-CODE has now 719 manually curated #condensates (and ~40% are #human associated!)
💡Check out new #condensates and updated #protein - condensate connections at cd-code.org
#Bioinformatics #DatabaseUpdate #IDR #RNP #RBP #cdcode
Reposted by CrowDsourcing COndensate Database & Encyclopedia
😊 I had the pleasure to turn this exciting @cellpress.bsky.social paper into a video-abstract. Check it out!
youtu.be/0REvwcuOao8
Thanks to the authors for writing the script and to @hymanlab.bsky.social and to @mpi-cbg.de for sharing it!
youtu.be/0REvwcuOao8
Thanks to the authors for writing the script and to @hymanlab.bsky.social and to @mpi-cbg.de for sharing it!
May 28, 2025 at 7:20 PM
😊 I had the pleasure to turn this exciting @cellpress.bsky.social paper into a video-abstract. Check it out!
youtu.be/0REvwcuOao8
Thanks to the authors for writing the script and to @hymanlab.bsky.social and to @mpi-cbg.de for sharing it!
youtu.be/0REvwcuOao8
Thanks to the authors for writing the script and to @hymanlab.bsky.social and to @mpi-cbg.de for sharing it!
We're really excited that CD-CODE is now cross-referenced by #UniProt and has already been included in the latest release: www.uniprot.org/release-note...
Spreading knowledge about #biomolecular #condensates 🥳
@ebi.embl.org @sib.swiss @mpi-cbg.de @tothpetroczylab.bsky.social @hymanlab.bsky.social
Spreading knowledge about #biomolecular #condensates 🥳
@ebi.embl.org @sib.swiss @mpi-cbg.de @tothpetroczylab.bsky.social @hymanlab.bsky.social
UniProt
UniProt is the world's leading high-quality, comprehensive and freely accessible resource of protein sequence and functional information.
www.uniprot.org
April 28, 2025 at 8:42 AM
We're really excited that CD-CODE is now cross-referenced by #UniProt and has already been included in the latest release: www.uniprot.org/release-note...
Spreading knowledge about #biomolecular #condensates 🥳
@ebi.embl.org @sib.swiss @mpi-cbg.de @tothpetroczylab.bsky.social @hymanlab.bsky.social
Spreading knowledge about #biomolecular #condensates 🥳
@ebi.embl.org @sib.swiss @mpi-cbg.de @tothpetroczylab.bsky.social @hymanlab.bsky.social
Reposted by CrowDsourcing COndensate Database & Encyclopedia
The @tothpetroczylab.bsky.social together with the @albertilab-tud.bsky.social developed SHARK-capture to detect recurring patterns (motifs) in intrinsically disordered protein regions (IDRs). Publication in Protein Science. www.mpi-cbg.de/news-outreac...
March 25, 2025 at 3:45 PM
The @tothpetroczylab.bsky.social together with the @albertilab-tud.bsky.social developed SHARK-capture to detect recurring patterns (motifs) in intrinsically disordered protein regions (IDRs). Publication in Protein Science. www.mpi-cbg.de/news-outreac...
Reposted by CrowDsourcing COndensate Database & Encyclopedia
🚀 Exciting Opportunity 🚀
Do you have a passion for structural biology?
We're hiring at @PDBeurope! 🌟
Apply now to help annotate biological data 💻 🔬
🔗 embl.wd103.myworkdayjobs.com/en-US/EMBL/d...
Closing date: April 6, 2025
#JobOpening #StructuralBiology #Bioinformatics #ScienceJobs #Hiring
Do you have a passion for structural biology?
We're hiring at @PDBeurope! 🌟
Apply now to help annotate biological data 💻 🔬
🔗 embl.wd103.myworkdayjobs.com/en-US/EMBL/d...
Closing date: April 6, 2025
#JobOpening #StructuralBiology #Bioinformatics #ScienceJobs #Hiring
March 12, 2025 at 3:00 PM
🚀 Exciting Opportunity 🚀
Do you have a passion for structural biology?
We're hiring at @PDBeurope! 🌟
Apply now to help annotate biological data 💻 🔬
🔗 embl.wd103.myworkdayjobs.com/en-US/EMBL/d...
Closing date: April 6, 2025
#JobOpening #StructuralBiology #Bioinformatics #ScienceJobs #Hiring
Do you have a passion for structural biology?
We're hiring at @PDBeurope! 🌟
Apply now to help annotate biological data 💻 🔬
🔗 embl.wd103.myworkdayjobs.com/en-US/EMBL/d...
Closing date: April 6, 2025
#JobOpening #StructuralBiology #Bioinformatics #ScienceJobs #Hiring
🍃CD-CODE update v1.09 is here!🍃
👀Check out the new #biomolecular #condensates at cd-code.org
👀We're continuing to update #Protein - #condensate connections and resolve issues!
Join us to share your #condensate #expertise as a contributor: cd-code.org/signup
#Bioinformatics #DatabaseUpdate #IDR
👀Check out the new #biomolecular #condensates at cd-code.org
👀We're continuing to update #Protein - #condensate connections and resolve issues!
Join us to share your #condensate #expertise as a contributor: cd-code.org/signup
#Bioinformatics #DatabaseUpdate #IDR
a group of ducklings are running in a field .
ALT: a group of ducklings are running in a field .
media.tenor.com
March 7, 2025 at 12:47 PM
🍃CD-CODE update v1.09 is here!🍃
👀Check out the new #biomolecular #condensates at cd-code.org
👀We're continuing to update #Protein - #condensate connections and resolve issues!
Join us to share your #condensate #expertise as a contributor: cd-code.org/signup
#Bioinformatics #DatabaseUpdate #IDR
👀Check out the new #biomolecular #condensates at cd-code.org
👀We're continuing to update #Protein - #condensate connections and resolve issues!
Join us to share your #condensate #expertise as a contributor: cd-code.org/signup
#Bioinformatics #DatabaseUpdate #IDR
Reposted by CrowDsourcing COndensate Database & Encyclopedia
The research group of Agnes Toth-Petroczy @tothpetroczylab.bsky.social is looking for an experimental Postdoc (m/f/d) in protein evolution of biomolecular condensates. Apply now! careers.mpi-cbg.de/jobs/5312959...
February 5, 2025 at 1:53 PM
The research group of Agnes Toth-Petroczy @tothpetroczylab.bsky.social is looking for an experimental Postdoc (m/f/d) in protein evolution of biomolecular condensates. Apply now! careers.mpi-cbg.de/jobs/5312959...
Reposted by CrowDsourcing COndensate Database & Encyclopedia
Follow our research group leaders @mpicbg.bsky.social to get updates on their science activities! go.bsky.app/3gGPAgM
January 28, 2025 at 12:00 PM
Follow our research group leaders @mpicbg.bsky.social to get updates on their science activities! go.bsky.app/3gGPAgM
Reposted by CrowDsourcing COndensate Database & Encyclopedia
Get news from science institutes and universities, located in Dresden, Germany. Please add missing ones in the comments. go.bsky.app/BgRhagp
January 28, 2025 at 2:45 PM
Get news from science institutes and universities, located in Dresden, Germany. Please add missing ones in the comments. go.bsky.app/BgRhagp
Reposted by CrowDsourcing COndensate Database & Encyclopedia
We are looking for a Student Helper in International Culture and Policies. Apply now and join us! careers.mpi-cbg.de/jobs/5276094...
January 21, 2025 at 1:54 PM
We are looking for a Student Helper in International Culture and Policies. Apply now and join us! careers.mpi-cbg.de/jobs/5276094...
Reposted by CrowDsourcing COndensate Database & Encyclopedia
Our PICNIC tool predicts condensate-proteins regardless of their structural disorder across organisms @naturecomms.bsky.social. Congratulations to @annaha-poetry-art.bsky.social for developing the algorithm and to Hari
@hymanlab.bsky.social for the experiments! www.nature.com/articles/s41...
@hymanlab.bsky.social for the experiments! www.nature.com/articles/s41...
PICNIC accurately predicts condensate-forming proteins regardless of their structural disorder across organisms - Nature Communications
Here the authors report PICNIC (Proteins Involved in CoNdensates In Cells), a machine learning algorithm that predicts approximately 40–60% of proteins form condensates in various organisms, showing n...
www.nature.com
December 12, 2024 at 8:27 PM
Our PICNIC tool predicts condensate-proteins regardless of their structural disorder across organisms @naturecomms.bsky.social. Congratulations to @annaha-poetry-art.bsky.social for developing the algorithm and to Hari
@hymanlab.bsky.social for the experiments! www.nature.com/articles/s41...
@hymanlab.bsky.social for the experiments! www.nature.com/articles/s41...
✨Winter CD-CODE update to v1.08!✨
❄️ New #biomolecular #condensates added (total ⚪: 680)
❄️ #Protein - #condensate connections updated
❄️ Species attributes fixed 🤩
👀Check the current version here: cd-code.org
Join us to become a contributor: cd-code.org/signup
#DatabaseUpdate #Bioinformatics #IDR
❄️ New #biomolecular #condensates added (total ⚪: 680)
❄️ #Protein - #condensate connections updated
❄️ Species attributes fixed 🤩
👀Check the current version here: cd-code.org
Join us to become a contributor: cd-code.org/signup
#DatabaseUpdate #Bioinformatics #IDR
a row of penguins are walking in the snow
ALT: a row of penguins are walking in the snow
media.tenor.com
December 9, 2024 at 2:29 PM
✨Winter CD-CODE update to v1.08!✨
❄️ New #biomolecular #condensates added (total ⚪: 680)
❄️ #Protein - #condensate connections updated
❄️ Species attributes fixed 🤩
👀Check the current version here: cd-code.org
Join us to become a contributor: cd-code.org/signup
#DatabaseUpdate #Bioinformatics #IDR
❄️ New #biomolecular #condensates added (total ⚪: 680)
❄️ #Protein - #condensate connections updated
❄️ Species attributes fixed 🤩
👀Check the current version here: cd-code.org
Join us to become a contributor: cd-code.org/signup
#DatabaseUpdate #Bioinformatics #IDR
Congratulations, Agnes! 🤩
I am honored and excited to be part of the EMBO YIP!
Agnes Toth-Petroczy, research group leader @mpicbg.bsky.social and the Center for Systems Biology Dresden, becomes a member of the EMBO Young Investigator Programme. The program supports young group leaders in Europe and beyond. Congratulations! 🥳 www.mpi-cbg.de/news-outreac...
December 4, 2024 at 3:25 PM
Congratulations, Agnes! 🤩
Reposted by CrowDsourcing COndensate Database & Encyclopedia
If you are a PhD student and like protein disorder (or want to learn more), Birthe Kragelund @bbkrage.bsky.social and Kristian Strømgaard are organizing a PhD course on How IDPs work 🧶🧬🧪 Note the cost if you are not at a Danish university.
Details: phdcourses.ku.dk/DetailKursus...
Details: phdcourses.ku.dk/DetailKursus...
November 25, 2024 at 4:13 PM
If you are a PhD student and like protein disorder (or want to learn more), Birthe Kragelund @bbkrage.bsky.social and Kristian Strømgaard are organizing a PhD course on How IDPs work 🧶🧬🧪 Note the cost if you are not at a Danish university.
Details: phdcourses.ku.dk/DetailKursus...
Details: phdcourses.ku.dk/DetailKursus...
Reposted by CrowDsourcing COndensate Database & Encyclopedia
Hello Bluesky! We're thrilled to announce an open PhD position on exploring controlling condensate membrane attachment and exocytosis! Collaborate across Europe in the ComeInCell EU network. Apply now! Details: www.comeincell.org & www.ru.nl/en/working-a...
ComeInCell – Doctoral Network on Integrative Synthetic Cell Design
www.comeincell.org
November 18, 2024 at 10:31 AM
Hello Bluesky! We're thrilled to announce an open PhD position on exploring controlling condensate membrane attachment and exocytosis! Collaborate across Europe in the ComeInCell EU network. Apply now! Details: www.comeincell.org & www.ru.nl/en/working-a...
Thank you, @rnadavid.bsky.social for compiling this starter pack 🤩
Join the condensate crowd!
#condensates
#phaseseparation
#granules
#IDPs
Join the condensate crowd!
#condensates
#phaseseparation
#granules
#IDPs
Biomolecular condensate starter pack!
Trying to compile & to bring together biomolecular condensate enthusiasts & critics!
Please join this non-exhaustive (sorry!) collection & just ping me for addition.
#condensates, #phaseseparation, #granules, #IDPs
go.bsky.app/NFqmffa
Trying to compile & to bring together biomolecular condensate enthusiasts & critics!
Please join this non-exhaustive (sorry!) collection & just ping me for addition.
#condensates, #phaseseparation, #granules, #IDPs
go.bsky.app/NFqmffa
November 18, 2024 at 8:35 PM
Thank you, @rnadavid.bsky.social for compiling this starter pack 🤩
Join the condensate crowd!
#condensates
#phaseseparation
#granules
#IDPs
Join the condensate crowd!
#condensates
#phaseseparation
#granules
#IDPs
Reposted by CrowDsourcing COndensate Database & Encyclopedia
The Martin lab has an open postdoc position at the interface of #cytoskeleton and #condensate biology, in a fantastic research community!
If interested, do not hesitate to contact us: mocel.unige.ch/research-gro...
Please RT!
If interested, do not hesitate to contact us: mocel.unige.ch/research-gro...
Please RT!
October 23, 2024 at 4:24 PM
The Martin lab has an open postdoc position at the interface of #cytoskeleton and #condensate biology, in a fantastic research community!
If interested, do not hesitate to contact us: mocel.unige.ch/research-gro...
Please RT!
If interested, do not hesitate to contact us: mocel.unige.ch/research-gro...
Please RT!
🔊☎️Calling the hive mind of the #Condensate Community of #bluesky: Join us in curating the CD-CODE!
Do you have a favorite condensate or are researching some that are not yet in cd-code.org?
We want your input and expertise!🧠
🔗Easy sign-up here: cd-code.org/signup
and add a new condensate 🎦⤵️
Do you have a favorite condensate or are researching some that are not yet in cd-code.org?
We want your input and expertise!🧠
🔗Easy sign-up here: cd-code.org/signup
and add a new condensate 🎦⤵️
November 14, 2024 at 12:19 PM
🔊☎️Calling the hive mind of the #Condensate Community of #bluesky: Join us in curating the CD-CODE!
Do you have a favorite condensate or are researching some that are not yet in cd-code.org?
We want your input and expertise!🧠
🔗Easy sign-up here: cd-code.org/signup
and add a new condensate 🎦⤵️
Do you have a favorite condensate or are researching some that are not yet in cd-code.org?
We want your input and expertise!🧠
🔗Easy sign-up here: cd-code.org/signup
and add a new condensate 🎦⤵️
🚨Condensate of the Month is Stress Granule!
#StressGranules (#SGs) are dynamically forming cytoplasmic condensates that form in response to various cellular stresses.
🤩In CD-CODE there are more than 10 species and more than 1300 #protein associations described for SGs.
#StressGranules (#SGs) are dynamically forming cytoplasmic condensates that form in response to various cellular stresses.
🤩In CD-CODE there are more than 10 species and more than 1300 #protein associations described for SGs.
November 13, 2024 at 10:01 AM
🚨Condensate of the Month is Stress Granule!
#StressGranules (#SGs) are dynamically forming cytoplasmic condensates that form in response to various cellular stresses.
🤩In CD-CODE there are more than 10 species and more than 1300 #protein associations described for SGs.
#StressGranules (#SGs) are dynamically forming cytoplasmic condensates that form in response to various cellular stresses.
🤩In CD-CODE there are more than 10 species and more than 1300 #protein associations described for SGs.
🍂🌿Latest #CDCODE release:
🥳Version 1.07 is here: cd-code.org
🌟We focused on improving #species attributions and updating missing #condensate features.
Help us with your condensate expertise!🧠
Join us to become a contributor: cd-code.org/signup
🥳Version 1.07 is here: cd-code.org
🌟We focused on improving #species attributions and updating missing #condensate features.
Help us with your condensate expertise!🧠
Join us to become a contributor: cd-code.org/signup
a pile of leaves on the ground with a white dog in the foreground
ALT: a pile of leaves on the ground with a white dog in the foreground
media.tenor.com
November 13, 2024 at 9:50 AM
🍂🌿Latest #CDCODE release:
🥳Version 1.07 is here: cd-code.org
🌟We focused on improving #species attributions and updating missing #condensate features.
Help us with your condensate expertise!🧠
Join us to become a contributor: cd-code.org/signup
🥳Version 1.07 is here: cd-code.org
🌟We focused on improving #species attributions and updating missing #condensate features.
Help us with your condensate expertise!🧠
Join us to become a contributor: cd-code.org/signup