Mike Blazanin
@mikeblazanin.bsky.social
3.5K followers 3K following 190 posts
Postdoc with @kayla-king.bsky.social and @sarperotto.bsky.social at UBC. Host-pathogen evolution. C. elegans, phages, and bacterial communities. Modeling and experimental evolution. Microbial and computational methods. https://mikeblazanin.com/
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Reposted by Mike Blazanin
jcamthrash.bsky.social
Carbon source diversity shapes bacterial interspecies interactions academic.oup.com/ismej/advanc... #jcampubs
Reposted by Mike Blazanin
surtlab.bsky.social
As coding gets more plug and play, it becomes IMPERATIVE for us as educators to teach fundamentals about what the statistical tests are comparing and assumptions.

Students might not need to understand how to code things up, but they should understand what the snippets are doing and why
hormiga.bsky.social
Y'all. I just got ChatGPT to do everything in R for this manuscript. I mean EVERYTHING. And it's all legit and reproducible. I'm shook.

How are we mentoring our trainees in statistics now? Who needs to learn coding in R line by line, and who doesn't?

scienceforeveryone.science/statistics-i...
Statistics in the era of AI
How do we mentor, teach, and do stats when AI can do so much of the work?
scienceforeveryone.science
Reposted by Mike Blazanin
carlzimmer.com
Today my @nytimes.com colleagues and I are launching a new series called Lost Science. We interview US scientists who can no longer discover something new about our world, thanks to this year‘s cuts. Here is my first interview with a scientist who studied bees and fires. Gift link: nyti.ms/3IWXbiE
nyti.ms
Reposted by Mike Blazanin
oliverio.bsky.social
Accepted version of our article "Half of microbial eukaryote literature focuses on only twelve human parasites" now out in ISMEJ!

Awesome effort led by undergrad Joanna Lepper and with @hbrappap.bsky.social.
Reposted by Mike Blazanin
cathyhernandez.bsky.social
Very happy to share that I will be starting as an Assistant Professor in the department of Biological Sciences at the University of South Carolina in January! My group will be working on environmental phage ecology and evolution, and I am recruiting for the upcoming year (more info below).
A graphic advertising phage ecology and evolution research at the University of South Carolina, showing a central image of a tide pool flanked by a photo of an agar plate containing diverse microbes and a TEM image of a virus particle.
mikeblazanin.bsky.social
+1 for that endorsement
noahhoupt.bsky.social
Cathy is one of the most brilliant, supportive, and thoughtful scientists and mentors I’ve had the privilege of working with.

I would recommend working with Cathy to any student interested in bacteria-phage interactions.

Congrats, Cathy!! We will miss you dearly.
cathyhernandez.bsky.social
Very happy to share that I will be starting as an Assistant Professor in the department of Biological Sciences at the University of South Carolina in January! My group will be working on environmental phage ecology and evolution, and I am recruiting for the upcoming year (more info below).
mikeblazanin.bsky.social
Highly recommend working with Chang-Yu if you get the chance!
changyuchang.bsky.social
Excited to share that I’ll be starting my research group in Nov 2025 at the Biodiversity Research Center, Academia Sinica in Taipei🎉

We study how eco & evo rules govern complex systems layered by hosts🌱& symbionts🦠 & mobile genes🧬

Recruiting soon at all levels!
🔗 chang-yu-chang.github.io/changlab/
Laboratory of Microbial Symbiosis, Ecology, and Evolution
chang-yu-chang.github.io
Reposted by Mike Blazanin
jpodwyer.bsky.social
For “Reflections on the history of modeling and theory”, @sarperotto.bsky.social and I met with Joel Cohen. We learn how he navigated math and biology, the value of embracing ignorance, and what is a population. Or really, what _isn't_ a population: www.youtube.com/watch?v=RCt9...
@smtpb.bsky.social
Reflections on Modeling and Theory in Population Biology: Joel Cohen
YouTube video by SMTPB
www.youtube.com
Reposted by Mike Blazanin
uocmicrobiology.bsky.social
UChicago Microbiology is searching for tenured or tenure-track faculty working in host-pathogens interactions, viral and bacterial pathogenesis, and emerging infectious diseases. Come join our vibrant Department! microbiology.uchicago.edu
Apply here apply.interfolio.com/174404
Department of Microbiology | The University of Chicago
microbiology.uchicago.edu
Reposted by Mike Blazanin
Reposted by Mike Blazanin
napaaqtuk.bsky.social
I have a fabulous undergrad who has a lot of experience with QIIME2 & using R to analyze microbiome data. She is looking for a job starting in January. Would love to learn more bench and field skills (will be getting some in her last 2 months). Open to academic, industry, government jobs in the US.
Reposted by Mike Blazanin
oschwengers.bsky.social
Unbelievable, Bakta reached its 1,000th citation!

A huge shout out and thank you to all Bakta users, bug reporters, those sharing ideas and suggesting features...

...just the entire incredibly supporting binfie community!

Without you, Bakta wouldn't be the same.

Thank you!
Reposted by Mike Blazanin
cazares-adr.bsky.social
Imagine we could travel back in time ⏪⌛️to explore the world of bacterial pathogens before humans discovered and industrialised antibiotics

We just did that to study the history of #AMR spread @science.org
doi.org/10.1126/scie...

If you like time travel & biology, this 🧵is for you👇
Pre- and postantibiotic epoch: The historical spread of antimicrobial resistance
Plasmids are now the primary vectors of antimicrobial resistance, but our understanding of how human industrialisation of antibiotics influenced their evolution is limited by a paucity of data predati...
doi.org
Reposted by Mike Blazanin
brockhurstlab.bsky.social
New preprint!

Ever wondered why only a fraction of genomes encode CRISPR immunity? 🧬 🦠

Turns out CRISPR is rarely beneficial against virulent phages, being most beneficial against those for which resistance mutations are rare!

An epic effort by Rosanna Wright

www.biorxiv.org/content/10.1...
Resistance mutation supply modulates the benefit of CRISPR immunity against virulent phages
Only a fraction of bacterial genomes encode CRISPR-Cas systems but the selective causes of this variation are unexplained. How naturally virulent bacteriophages (phages) select for CRISPR immunity has...
www.biorxiv.org
Reposted by Mike Blazanin
khadershabaana.bsky.social
UChicago Microbiology is searching for tenured or tenure-track faculty working in host-pathogens interactions, viral and bacterial pathogenesis, and emerging infectious diseases. Come join our vibrant Department! microbiology.uchicago.edu
Apply here apply.interfolio.com/174404
Apply - Interfolio {{$ctrl.$state.data.pageTitle}} - Apply - Interfolio
apply.interfolio.com
Reposted by Mike Blazanin
ameliarandich.bsky.social
Interested in a tenure track position teaching and doing research with undergrads at a PUI? We are looking for a broadly-defined microbiologist who can teach Med Micro and Immunology. Apply at universityofscrantonjobs.com/postings/8308. Pls share widely to feeds (& on twitter if you still tweet)! 🦠
Reposted by Mike Blazanin
georgiarapti.bsky.social
Are you an early career scientist who wants to get specialist training in C. elegans model for your laboratory research? we co-organize again the EMBO C. elegans course! Do not miss applying!
events.embl.org
🪱 Ready to take your C. elegans skills to the next level? Join our #EMBOCelegans course!

🎯 Learn hands-on genome editing, AI-driven imaging, microfluidics & uncover development, physiology & evolutionary insights.

📍 EMBL Heidelberg
📅 23 – 29 Mar 2026
👉 Apply by 8 Dec: s.embl.org/cel26-01-bl
Reposted by Mike Blazanin