@toddfallesen.bsky.social
Reposted
We’re looking forward to welcoming families to Discovery Day tomorrow 🎉
It’s going to be a hot and sunny day, so please come prepared with hats, sun cream and water.
Visit the webpage for more information about the day ⬇️
🔗 www.crick.ac.uk/whats-on/dis...
It’s going to be a hot and sunny day, so please come prepared with hats, sun cream and water.
Visit the webpage for more information about the day ⬇️
🔗 www.crick.ac.uk/whats-on/dis...
June 20, 2025 at 10:46 AM
We’re looking forward to welcoming families to Discovery Day tomorrow 🎉
It’s going to be a hot and sunny day, so please come prepared with hats, sun cream and water.
Visit the webpage for more information about the day ⬇️
🔗 www.crick.ac.uk/whats-on/dis...
It’s going to be a hot and sunny day, so please come prepared with hats, sun cream and water.
Visit the webpage for more information about the day ⬇️
🔗 www.crick.ac.uk/whats-on/dis...
Reposted
Our protocol with all the details you'll need to detect and quantify phospo-SMAD proteins in your (human) embryo, is finally out today @cp-starprotocols.bsky.social.
Thanks again to my wonderful co-author @toddfallesen.bsky.social and the @niakanlab.bsky.social.
www.sciencedirect.com/science/arti...
Thanks again to my wonderful co-author @toddfallesen.bsky.social and the @niakanlab.bsky.social.
www.sciencedirect.com/science/arti...
Protocol for immunofluorescence detection and quantification of phosphorylated SMAD proteins in human blastocysts
The transforming growth factor β (TGF-β) signaling superfamily includes NODAL and bone morphogenetic protein (BMP) signaling, which lead to the phosph…
www.sciencedirect.com
May 28, 2025 at 9:42 AM
Our protocol with all the details you'll need to detect and quantify phospo-SMAD proteins in your (human) embryo, is finally out today @cp-starprotocols.bsky.social.
Thanks again to my wonderful co-author @toddfallesen.bsky.social and the @niakanlab.bsky.social.
www.sciencedirect.com/science/arti...
Thanks again to my wonderful co-author @toddfallesen.bsky.social and the @niakanlab.bsky.social.
www.sciencedirect.com/science/arti...
Need help with Cellprofiler? Ask me and others in the upcoming event!
Call 4 Help Pilot Event by GloBIAS, 22 Jan–5 Feb 2025! Offering life scientists a chance for hands-on guidance & support for #bioimage_analysis using Napari, Ilastik & CellProfiler.
💡 Details: www.globias.org/activities/c...
🔗 Sign up! Application until Friday 17 Jan: forms.gle/7hsJgramrFXB...
💡 Details: www.globias.org/activities/c...
🔗 Sign up! Application until Friday 17 Jan: forms.gle/7hsJgramrFXB...
https://forms.gle/7hsJgramrFXBzCjk6]
January 13, 2025 at 5:28 PM
Need help with Cellprofiler? Ask me and others in the upcoming event!
Great talk by Aastha Mathur from @eurobioimaging.bsky.social about community initiatives. Was really interesting to see the parallels between that and what's going on at @elixir-uk.bsky.social last week.
#cbias2024
#cbias2024
November 26, 2024 at 12:18 PM
Great talk by Aastha Mathur from @eurobioimaging.bsky.social about community initiatives. Was really interesting to see the parallels between that and what's going on at @elixir-uk.bsky.social last week.
#cbias2024
#cbias2024
Reposted
What a great All Hands! co-hosted with our members at Cardiff University.
Check this out. What a great pic of our community with our funders, scientific and industry advisory board and potential collaborators 👇
Check this out. What a great pic of our community with our funders, scientific and industry advisory board and potential collaborators 👇
November 21, 2024 at 4:29 PM
What a great All Hands! co-hosted with our members at Cardiff University.
Check this out. What a great pic of our community with our funders, scientific and industry advisory board and potential collaborators 👇
Check this out. What a great pic of our community with our funders, scientific and industry advisory board and potential collaborators 👇
November 26, 2024 at 10:57 AM
@guijacquemet.bsky.social ending with a couple slides on why you should submit your image analysis tools to Journal of Cell Science, and how you can get some training grants for microscopy from the @biologists.bsky.social
#cbias2024
#cbias2024
November 26, 2024 at 10:46 AM
@guijacquemet.bsky.social ending with a couple slides on why you should submit your image analysis tools to Journal of Cell Science, and how you can get some training grants for microscopy from the @biologists.bsky.social
#cbias2024
#cbias2024
Reposted
Microfluidic setup showing that attachment is flow rate dependent. #CBIAS2024 cell tracks analysed with CellTracks Colab notebook. www.biorxiv.org/content/10.1... #CBIAS2024
November 26, 2024 at 10:30 AM
Microfluidic setup showing that attachment is flow rate dependent. #CBIAS2024 cell tracks analysed with CellTracks Colab notebook. www.biorxiv.org/content/10.1... #CBIAS2024
Reposted
And now a talk from the superstar of cancer cell live imaging @guijacquemet.bsky.social ! Shedding the light on cancer cell extravasation with all you can dream of: #tooldev, #livetracking, #microfludics, #deeplearning
This is some very good stuff !
#CBIAS2024
This is some very good stuff !
#CBIAS2024
November 26, 2024 at 10:25 AM
And now a talk from the superstar of cancer cell live imaging @guijacquemet.bsky.social ! Shedding the light on cancer cell extravasation with all you can dream of: #tooldev, #livetracking, #microfludics, #deeplearning
This is some very good stuff !
#CBIAS2024
This is some very good stuff !
#CBIAS2024
@guijacquemet.bsky.social showing off some tools before getting started, and highlighting those who worked on them.
For image analysis tracking, seems like a great QR code to save!
#cbias2024
For image analysis tracking, seems like a great QR code to save!
#cbias2024
November 26, 2024 at 10:22 AM
@guijacquemet.bsky.social showing off some tools before getting started, and highlighting those who worked on them.
For image analysis tracking, seems like a great QR code to save!
#cbias2024
For image analysis tracking, seems like a great QR code to save!
#cbias2024
Matlab > napari 😉
Yellow: cancer cells, magenta: killer cells. Preprocessing, segmentation, tracking all done in MATLAB with a handy user interface. #CBIAS2024
November 26, 2024 at 10:11 AM
Matlab > napari 😉
I'm glad that I'm not the only one who likes using MATLAB still for making guis!
Gebhard Stopper great talk on tracking cancer cells at #cbias2024
Gebhard Stopper great talk on tracking cancer cells at #cbias2024
November 26, 2024 at 10:09 AM
I'm glad that I'm not the only one who likes using MATLAB still for making guis!
Gebhard Stopper great talk on tracking cancer cells at #cbias2024
Gebhard Stopper great talk on tracking cancer cells at #cbias2024
Reposted
Very impressive tech bite from @normanrz.bsky.social at @webknossos.bsky.social
webknossos.org
#CBIAS2024
webknossos.org
#CBIAS2024
November 25, 2024 at 2:33 PM
Very impressive tech bite from @normanrz.bsky.social at @webknossos.bsky.social
webknossos.org
#CBIAS2024
webknossos.org
#CBIAS2024
Reposted
It's a beautiful day to attend #CBIAS2024! Don't be late for my 9:30 talk, be there or be square
November 26, 2024 at 9:07 AM
It's a beautiful day to attend #CBIAS2024! Don't be late for my 9:30 talk, be there or be square
Reposted
Quickly followed by Rolf Harkes of Netherlands Cancer Institute on Predicting cell types from H&E using multiplex imaging and deep learning. Can AI give pathologists a helping hand? #CBIAS2024 pathologists want to be able to discuss with the model and the model cannot make clinical decisions.
November 25, 2024 at 2:10 PM
Quickly followed by Rolf Harkes of Netherlands Cancer Institute on Predicting cell types from H&E using multiplex imaging and deep learning. Can AI give pathologists a helping hand? #CBIAS2024 pathologists want to be able to discuss with the model and the model cannot make clinical decisions.
Reposted
Correlative imaging to overlay histological and multiplex 46 channel fluorescence data. Segment images and classify cells, then overlay back on H&E data. Harnessing citizen science for benchmarking #CBIAS2024
November 25, 2024 at 2:17 PM
Correlative imaging to overlay histological and multiplex 46 channel fluorescence data. Segment images and classify cells, then overlay back on H&E data. Harnessing citizen science for benchmarking #CBIAS2024
Reposted
Not looking for a needle in a hay stack but for nodes in a bundle of axons and not doing it by hand! #CBIAS2024
November 25, 2024 at 2:39 PM
Not looking for a needle in a hay stack but for nodes in a bundle of axons and not doing it by hand! #CBIAS2024
Reposted
Now on stage at #CBIAS2024: Assaf Zaritsky on the visual interpretation of image-to-image transformation models used for virtual fluorescence labeling from phase-contrast images
November 25, 2024 at 3:46 PM
Now on stage at #CBIAS2024: Assaf Zaritsky on the visual interpretation of image-to-image transformation models used for virtual fluorescence labeling from phase-contrast images
Reposted
Another case of organelle
segmentation from unlabelled bright field images, but few applications and multiple reasons for the problems. #CBIAS2024
segmentation from unlabelled bright field images, but few applications and multiple reasons for the problems. #CBIAS2024
November 25, 2024 at 3:47 PM
Another case of organelle
segmentation from unlabelled bright field images, but few applications and multiple reasons for the problems. #CBIAS2024
segmentation from unlabelled bright field images, but few applications and multiple reasons for the problems. #CBIAS2024
Reposted
Audience participation not just through asking questions but also by catching the throwable mic. #CBIAS2024
November 25, 2024 at 4:25 PM
Audience participation not just through asking questions but also by catching the throwable mic. #CBIAS2024
@laurawiggins13.bsky.social
Great talk on deciphering and classifying DNA topology from AFM.
First thing I was reminded of was a recent physics world article! As I'm a IOP nerd too physicsworld.com/a/spot-the-k....
#cbias2024 #instituteofphysics
Great talk on deciphering and classifying DNA topology from AFM.
First thing I was reminded of was a recent physics world article! As I'm a IOP nerd too physicsworld.com/a/spot-the-k....
#cbias2024 #instituteofphysics
November 25, 2024 at 2:08 PM
@laurawiggins13.bsky.social
Great talk on deciphering and classifying DNA topology from AFM.
First thing I was reminded of was a recent physics world article! As I'm a IOP nerd too physicsworld.com/a/spot-the-k....
#cbias2024 #instituteofphysics
Great talk on deciphering and classifying DNA topology from AFM.
First thing I was reminded of was a recent physics world article! As I'm a IOP nerd too physicsworld.com/a/spot-the-k....
#cbias2024 #instituteofphysics
Reposted
Good thing the #CBIAS2024 organizers sent a plan to reach the @thecrick.bsky.social , I almost missed the tiny building
November 25, 2024 at 9:21 AM
Good thing the #CBIAS2024 organizers sent a plan to reach the @thecrick.bsky.social , I almost missed the tiny building
Reposted
Get involved in the image analysis community by responding to this survey forum.image.sc/t/2024-image... #CBIAS2024
November 25, 2024 at 10:45 AM
Get involved in the image analysis community by responding to this survey forum.image.sc/t/2024-image... #CBIAS2024
Reposted
Register now for the Crick Bioimage Analysis Symposium 🧫
We’ll be joined by leading experts to discuss the latest tools and techniques of image analysis and explore their future potential.
#CBIAS2024
📅 25-26 November
🎟️ Online and in-person tickets
www.crick.ac.uk/whats-on/cri...
We’ll be joined by leading experts to discuss the latest tools and techniques of image analysis and explore their future potential.
#CBIAS2024
📅 25-26 November
🎟️ Online and in-person tickets
www.crick.ac.uk/whats-on/cri...
Crick BioImage Analysis Symposium 2024
www.crick.ac.uk
November 11, 2024 at 4:07 PM
Register now for the Crick Bioimage Analysis Symposium 🧫
We’ll be joined by leading experts to discuss the latest tools and techniques of image analysis and explore their future potential.
#CBIAS2024
📅 25-26 November
🎟️ Online and in-person tickets
www.crick.ac.uk/whats-on/cri...
We’ll be joined by leading experts to discuss the latest tools and techniques of image analysis and explore their future potential.
#CBIAS2024
📅 25-26 November
🎟️ Online and in-person tickets
www.crick.ac.uk/whats-on/cri...