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Bo Porse @porsebo.bsky.social · Jun 3

WE ARE RECRUITING: A tenure-track group leader position in translational cancer research is available at the Finsen Laboratory in Copenhagen. Come join an excellent and friendly research environment combining both hospital and university affiliated groups

candidate.hr-manager.net/ApplicationI...

Tenure-track Research Group leader position in translational cancer research at the Finsen Laboratory, Rigshospitalet, Copenhagen University Hospital

A group leader position at the Finsen Laboratory, Rigshospitalet, Copenhagen University Hospital is open for appointment as soon as possible. The position is av

candidate.hr-manager.net

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Rob Patro @robp.bsky.social · Apr 7

OMG... The name here is so good! This goes right to the top ten list of names in genomics :).

albinsan.bsky.social @albinsan.bsky.social · Apr 7

Very proud to share this work just out in NAR: spearheaded by @jamieauxillos.bsky.social and Arnauld Stigliani: TLDR-seq, a method for 5’ to 3’ end long-read sequencing of capped RNAs regardless of 3’ end polyadenylation, based on the @nanoporetech.com platform. (1/4) tinyurl.com/3c2ksdmr

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albinsan.bsky.social @albinsan.bsky.social · Apr 7

@edv.bsky.social cial (Bergen and Oslo University) and @heick.bsky.social (Aarhus University) for co-supervision, and many other collaborators for input along the way. (4/4)

albinsan.bsky.social @albinsan.bsky.social · Apr 7

Big cred to co-authors and collaborators: Christian Vaagensø for excellent lab support, @willgarland.bsky.social for mES cell work, Adnan Niazi for polyadenylation calling algorithm development ...(3/4)

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albinsan.bsky.social @albinsan.bsky.social · Apr 7

Using TLDR-seq, we demonstrate full-length sequencing of mRNAs and non-polyadenylated non-coding RNAs, including enhancer RNAs and PROMPTs, in the same experiment. We also show a link between fine-grained TSS selection and 3’ end processing. (2/4)

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albinsan.bsky.social @albinsan.bsky.social · Apr 7

Very proud to share this work just out in NAR: spearheaded by @jamieauxillos.bsky.social and Arnauld Stigliani: TLDR-seq, a method for 5’ to 3’ end long-read sequencing of capped RNAs regardless of 3’ end polyadenylation, based on the @nanoporetech.com platform. (1/4) tinyurl.com/3c2ksdmr

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Meanwhile in Ukraine @meanwhileua.bsky.social · Mar 2

RETWEET if you stand with President Zelenskyy against Trump and Vance!

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albinsan.bsky.social @albinsan.bsky.social · Feb 18

Mycket bra skrivet. Håller inte alltid med dig om allt du skriver men den här posten är 100%.

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Torben Heick Jensen @heick.bsky.social · Feb 12

Postdoc positions on nuclear RNA biology available in the Heick Jensen lab. Come join us in tiny Denmark. Interested? - then follow this link: mbg.au.dk/aktuelt/ledi...

Postdoc positions in Nuclear RNA Biology - Ledig stilling på Aarhus Universitet

Ledig stilling ved Institut for Molekylærbiologi og Genetik - RNA-biologi og -innovation, Aarhus Universitet

mbg.au.dk

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Robert Krautz @robertkrautz.bsky.social · Feb 7

Job alert.🚨 Come join us in beautiful Copenhagen 🇩🇰 to develop computational tools to decode gene regulatory mechanisms from single cell data.💻🔬🧫 @randersson.bsky.social will be hiring either a PhD or a PostDoc. There is no supervisor I could recommend more!

tinyurl.com/3v4uvmz4
tinyurl.com/yc83enfa

PhD student - Computational modeling of gene regulation in single cells

Post a job in 3min, or find thousands of job offers like this one at jobRxiv!

jobrxiv.org

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albinsan.bsky.social @albinsan.bsky.social · Feb 6

Also special shoutout to Yifan Dai in my group who analyzed the nuclear single cell RNA-seq data and Mette Flink in the Falsig Pedersen lab who generated the same data (very difficult to do from cell lines).

albinsan.bsky.social @albinsan.bsky.social · Feb 6

Happy to share this work by Rolver, Roda, et al: very nice collaboration with Falsig Pedersen and Arnes groups. We show that acid adaptation of cancer cells enriches for pancreatic cancer stem cell phenotypes with unusual traits via several trajectories www.sciencedirect.com/science/arti...

Tumor microenvironment acidosis favors pancreatic cancer stem cell properties and in vivo metastasis

The acidic tumor microenvironment favors cancer aggressiveness via incompletely understood pathways. Here, we asked whether adaptation to environmenta…

www.sciencedirect.com

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Anthony Mathelier @amathelier.bsky.social · Feb 4

🚨 PhD in Bioinformatics & Gene Regulation 🚨

Join the Bioinformatics in Life Science (BiLS) initiative through a multidisciplinary project to unravel gene regulation from DNA to proteins, co-supervised by E. Valen @jonnings.bsky.social and me!

www.jobbnorge.no/en/available...

PhD Research Fellow in Bioinformatics and Gene Regulation (274506) | University of Oslo

Job title: PhD Research Fellow in Bioinformatics and Gene Regulation (274506), Employer: University of Oslo, Deadline: Friday, February 28, 2025

www.jobbnorge.no

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Anthony Mathelier @amathelier.bsky.social · Jan 8

We want to make JASPAR (jaspar.elixir.no) even better for our users! Please share your experience and help us enhance the database by taking a quick survey: nettskjema.no/a/467842.
Your insights make a difference!

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albinsan.bsky.social @albinsan.bsky.social · Jan 8

Last reminder: Postdoc position focused on RNA degradation biology, CRISPR gene editing and Nanopore long read sequencing in my laboratory in Copenhagen: please spread to great candidates. Deadline 15 Jan. candidate.hr-manager.net/ApplicationI...

Postdoc in RNA degradation biology, CRISPR gene editing and Nanopore long read sequencing

Department of Biology Faculty of Science University of Copenhagen   The Sandelin group is looking to recruit a talented postdoctoral researcher to our high

candidate.hr-manager.net

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Lars Wilderäng @larswilderang.cornucopia.se · Jan 7

Påminnelse.

Lars Wilderäng @larswilderang.cornucopia.se · Jan 6

Förslag: För att öka interaktionen här på svenska Bluesky, återposta 2-3 stycken av de svenskar ni följers postningar dagligen, så det blir lite spridning och drar igång diskussioner.

Kommentera även 2-3 stycken av dem om det så bara är "bra skrivet".

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Oded Rechavi @odedrechavi.bsky.social · Dec 5

hot take: scientists are great people and should help each other live the best life possible

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Arnau Sebé-Pedrós @arnausebe.bsky.social · Nov 25

We have two open PhD positions in my group at @crg.eu.
We are seeking candidates with a background in computational and/or molecular biology, and with a broad interest in evolutionary biology, gene regulation, and comparative genomics.

📅Apply before January 12 here: www.crg.eu/en/content/t...

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Juan S. Bonifacino @juanbonifacino.bsky.social · Nov 17

Here are some free/open-source sites for the preparation of scientific illustrations, including icon libraries: bioicons.com, scidraw.io, bioart.niaid.nih.gov, inkscape.org, biogdp.com, reactome.org/icon-lib

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albinsan.bsky.social @albinsan.bsky.social · Nov 18

Postdoc position focused on RNA degradation biology, CRISPR gene editing and Nanopore long read sequencing in my laboratory in Copenhagen: please spread to great candidates. candidate.hr-manager.net/ApplicationI...

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albinsan.bsky.social @albinsan.bsky.social · Jan 25

Come and work with us in Copenhagen: Postdoc in RNA degradation machine learning . Exciting collaboration with Torben Heick grupp using cutting edge genomics methods, including nanopore sequencing, and deep learning to pinpoint mechanisms for RNA degradation. jobportal.ku.dk/videnskabeli...

Postdoc in RNA degradation machine learning

jobportal.ku.dk

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albinsan.bsky.social @albinsan.bsky.social · Jan 25

Come and work with us in Copenhagen: Postdoc in RNA degradation machine learning . Exciting collaboration with Torben Heick grupp using cutting edge genomics methods, including nanopore sequencing, and deep learning to pinpoint mechanisms for RNA degradation. jobportal.ku.dk/videnskabeli...

Postdoc in RNA degradation machine learning

jobportal.ku.dk

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Anthony Mathelier @amathelier.bsky.social · Nov 14

Excited to announce the 10th release & 20th-anniversary update of JASPAR, a leading resource in computational regulatory genomics!

Important to note that JASPAR has a new URL: jaspar.elixir.no

The manuscript can be found at academic.oup.com/nar/advance-...

JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles

Abstract. JASPAR (https://jaspar.elixir.no/) is a widely-used open-access database presenting manually curated high-quality and non-redundant DNA-binding profil

academic.oup.com

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albinsan.bsky.social @albinsan.bsky.social · Nov 10

Also, you can download actual vector formats for the icons to modify if needed. Biorender does not allow that.

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Chenxin Li, PhD @chenxinli2.bsky.social · Nov 8

Not enough people know about bioicons.com
Open source vector graphics. Free alternatives to BioRender.

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