Alfredo Castello
@alf-castello.bsky.social
780 followers
950 following
14 posts
Professor of Systems Bioloy
MRC University of Glasgow Centre for Virus Research
#RNA #Virus #host-virus #OMICS #proteomics
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Reposted by Alfredo Castello
Brennan Lab CVR
@brennanlab.bsky.social
· Aug 13
Reposted by Alfredo Castello
Shabaz Lab
@shabazlab.bsky.social
· Jun 1
Integrating Alternative Fragmentation Techniques into Standard LC-MS Workflows Using a Single Deep Learning Model Enhances Proteome Coverage
We built and characterised a mass spectrometer capable of performing CID (both beam type and resonant type), UVPD, EID and ECD in an automated fashion during an LCMS type experiment. We exploited this...
www.biorxiv.org
Reposted by Alfredo Castello
Shabaz Lab
@shabazlab.bsky.social
· Jun 2
RNA binding regulation is a new dimension in the type I IFN response
The type I interferon (IFN-I) response shapes the intracellular environment to supress virus infection. Historically, this remodelling has been linked to the transcriptional induction of interferon st...
www.biorxiv.org
Shabaz Lab
@shabazlab.bsky.social
· Apr 7
Omics analyses uncover host networks defining virus-permissive and -hostile cellular states
The capacity of host cells to sustain or restrict virus infection is influenced by
their proteome. Understanding the compendium of proteins defining cellular permissiveness
is key to many questions in...
www.mcponline.org
Reposted by Alfredo Castello
Shabaz Lab
@shabazlab.bsky.social
· Mar 13
Addressing NHS chemistry: Efficient quenching of excess TMT reagent and reversing TMT-over labelling in proteomic samples by methylamine
N-Hydroxysuccinimide (NHS) ester chemistry is used extensively across proteomics sample
preparation. One of its increasingly prevalent applications is in isobaric reagent-based
quantitation such as iT...
www.mcponline.org
Reposted by Alfredo Castello
Reposted by Alfredo Castello
Reposted by Alfredo Castello
Reposted by Alfredo Castello
Reposted by Alfredo Castello
Reposted by Alfredo Castello
Mehdi Jafarnejad
@rnanomad.bsky.social
· Nov 19
Ribosome Quality Control mitigates the cytotoxicity of ribosome collisions induced by 5-Fluorouracil
Abstract. Ribosome quality control (RQC) resolves collided ribosomes, thus preventing their cytotoxic effects. The chemotherapeutic agent 5-Fluorouracil (5
academic.oup.com
Reposted by Alfredo Castello