Martin Vögele
@martinvoegele.bsky.social
5.3K followers 3K following 330 posts
Computational Biophysicist, Amateur Photographer, History+Language Nerd. All views my own. Website: https://martinvoegele.github.io/
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martinvoegele.bsky.social
Now online at JCTC:
“Is the Functional Response of a Receptor Determined by the Thermodynamics of Ligand Binding?”

Our answer: Yes, it is!
And we can use it to predict ligand efficacy.

pubs.acs.org/doi/10.1021/...
martinvoegele.bsky.social
The rats don't run this city.
The pigeons do. 😉
#Art #Photography #NYC #NewYork
Reposted by Martin Vögele
delalamo.xyz
I've put together a tool to renumber antibody structures using only main chain atomic coords. No sequence info is used at all. In the process I found a few numbering mistakes in Sabdab/PDB, which is numbered by sequence & thus sensitive to gaps/register errors (deleted prev post due to bugs)
GitHub - delalamo/SAbR: Structure-based antibody renumbering
Structure-based antibody renumbering. Contribute to delalamo/SAbR development by creating an account on GitHub.
github.com
Reposted by Martin Vögele
giuliotesei.bsky.social
I'm hiring for a PhD position at Malmö University, Sweden!

The project will focus on molecular modelling of proteins, lipids, and biomolecular condensates at cell membranes.

More details and application form: tinyurl.com/4zm92365

Please feel free to share!

@vetenskapsradet.bsky.social | @mau.se
Snapshot of a condensate near a lipid membrane with Swedish Research Council and Malmö University logos.
Reposted by Martin Vögele
franknoe.bsky.social
Join our BioEmu project @msftresearch.bsky.social AI for Science. In Berlin DE or Cambridge UK:

aka.ms/bioemu-ml - #MachineLearning Researcher
aka.ms/bioemu-data - Data Engineer
aka.ms/bioemu-applied - Applied Researcher
aka.ms/bioemu-principal - Principal Applied Researcher
Search Jobs | Microsoft Careers
aka.ms
martinvoegele.bsky.social
The Oculus is the main station house of the Port Authority Trans-Hudson (PATH) rapid Transit system which connects Manhattan to New Jersey. It opened on March 3, 2016, as part of the reconstruction of the World Trade Center complex after the 2001 terrorist attacks.

#Photography #NewYork #USA
Reposted by Martin Vögele
groupquintana.bsky.social
We are looking for 2-3 prospective graduate students to join our group starting the Fall 2026 term. Main projects include method development for ML, MD, drug design, and QM.
Please, apply through: lnkd.in/gnM_wC_H
LinkedIn
This link will take you to a page that’s not on LinkedIn
lnkd.in
Reposted by Martin Vögele
bejalab.bsky.social
Expanding the family of genetically encoded voltage indicators with a candidate Heliorhodopsin exhibiting near-infrared fluorescence www.sciencedirect.com/science/arti...
Reposted by Martin Vögele
wkhuber.bsky.social
Do you like theoretical biology, mathematical&conceptual modelling and want to apply yourself to cutting-edge research at all levels of biology, from molecules to ecosystems?

Come to EMBL! Scope includes physics-based models, emergence, statistics, ML/AI
embl.wd103.myworkdayjobs.com/en-US/EMBL/j...
martinvoegele.bsky.social
View of the #Brooklyn #Skyline from Liberty State Park.

#NewYork #Photography
martinvoegele.bsky.social
Without its public transit, New York would be little more than a sprawling village. The Transit Museum, located in a former subway station, honors the immense feats of engineering and coordination that keep the city going.

#Transit #Subway #Photography #NewYork #NYC #MTA
Reposted by Martin Vögele
fionachembot.bsky.social
If you rising senior PhD student and are interested to come to Europe as a postdoc, get in contact with PIs early (6-9 months ahead of time) and discuss postdoc funding options like fellowships
mattneuro.bsky.social
Can confirm. Depending on where you go, it can easily take six to nine months from when you apply for a fellowship, to when you can start.
Reposted by Martin Vögele
markusdeserno.bsky.social
I am super excited to announce that we have a tenure-track faculty position in biophysics open in the Department of Physics at Carnegie Mellon! 🧪

Interfolio link: apply.interfolio.com/174360

PLEASE, share widely across the blue skies!

Let me briefly explain what we're looking for:

1/10
Tenure-track Position in Biophysics at Carnegie Mellon University, Department of Physics

Location: Pittsburgh, PA
Open Date: Sep 19, 2025

Description
The Department of Physics at Carnegie Mellon University invites applications for a tenure-track faculty position in biophysics. The appointment is intended to be at the Assistant Professor level, but exceptional candidates at a higher level may also be considered. We seek outstanding candidates with a strong record in cellular and subcellular biophysics. Topics of particular interest include, but are not limited to, uncovering how key characteristics of living systems arise from the interplay between supramolecular cellular structures, how the emergent cellular circuitry defines goals and enables robust decision making, and how metabolic resources are allocated. This encompasses understanding of how information is learned, stored, transduced, and processed across subcellular structures. Applicants with theoretical, data science, or experimental backgrounds within biological physics are encouraged to apply. The ideal candidate will strengthen and extend research programs of current biophysics faculty in the Department of Physics and collaborate with broader life science activities across many departments at CMU and the wider Pittsburgh area.

More details on Interfolio: https://apply.interfolio.com/174360
martinvoegele.bsky.social
The Temple of Dendur was commissioned around 23 BCE by Emperor Augustus and dedicated to the goddess Isis. It came to the Metropolitan Museum in 1963 as a gift from Egypt after it was removed from its original site for the building of the Aswan Dam.

#AncientEgypt #Photography #NewYork #History
Reposted by Martin Vögele
physicstoday.bsky.social
Silvia Alonso-Pérez presents a look at the physics behind the theremin, the early electronic musical instrument that converts hand gestures into the eerie tones heard in the soundtracks of classic sci-fi films like The Day the Earth Stood Still.

#electronicmusic #physics #acoustics #scifi
Playing with electromagnetic waves: The science of the theremin
The physics behind the unique instrument lets players turn hand gestures into music.
pubs.aip.org
Reposted by Martin Vögele
gtsciences.bsky.social
Molecular fossils may not always be what they seem.

“Just as archaeologists know to be careful in how they interpret physical fossils, historians of protein evolution could take similar care in their interpretation of molecular fossils.”

- @lynnkamerlin.bsky.social in this co-authored article⤵️
Molecular ‘Fossils’ Offer Microscopic Clues to the Origins of Life – But They Take Care to Interpret
cos.gatech.edu
Reposted by Martin Vögele
franknoe.bsky.social
Postdoc position available in the BioEmu team at @msftresearch.bsky.social AI for Science - Berlin DE or Cambridge UK. Looking for candidates with backgrounds in #MachineLearning #AI Biophysics or Bioinformatics

jobs.careers.microsoft.com/global/en/jo...
Reposted by Martin Vögele
markusdeserno.bsky.social
Major cool membrane conference coming up next week! The Biomembrane Days 2025, organized by an amazing team from the MPI for Colloids and Interface Science @mpici.bsky.social: Rumy Dimova (@dimovalab.bsky.social), Helge Ewers, and Thomas Weikl. I'm so very much looking forward to attending! 🤩 🧪
Biomembrane Days 2025
Membranes form the intricately shaped compartments of life. The Biomembrane Days are a triannual workshop that highlights recent advances in understanding the morphology and molecular organization of ...
events.mpikg.mpg.de
Reposted by Martin Vögele
feworkshop.bsky.social
Save the date, my fellow computational alchemists! The upcoming '26 Workshop on Free Energy Methods in Drug Design will be held in Barcelona, Spain, on May 4-6, 2026. The registration link will be sent soon!
martinvoegele.bsky.social
Food carts in front of the Metropolitan Museum of Art.
#Photography #NewYork #NYC #StreetPhotography
martinvoegele.bsky.social
New York Harbor Views from Jersey City.
#Photography #BlackAndWhite