Utrecht Virology Lab
@utrechtvirology.bsky.social
2.2K followers 490 following 210 posts
We perform fundamental research on viruses and translate this knowledge into new methods to prevent or treat infections | Posts by group members. http://tinyurl.com/utrechtvirology
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utrechtvirology.bsky.social
A nifty trick our lab is using to improve structure prediction of viral membrane proteins in #AlphaFold3! 👇
danielhurdiss.bsky.social
Amazingly, this gave us a high-confidence transmembrane channel for both mouse and human NS3, with oleic acids forming a bilayer-like pattern.

Our group now call this the “fatty acid hack.”

The #alphafold predictions with and without fatty acids shown below 👇
Reposted by Utrecht Virology Lab
daumlab.bsky.social
Out in Science Advances: Our #cryoEM structure of HFTV1, a virus infecting the halophile #archaea. *First full atomic structure (containing all structural proteins) of any tailed virus!* Congrats and thanks to all co-authors and our fantastic collaborators! www.science.org/doi/10.1126/...
Cryo-EM resolves the structure of the archaeal dsDNA virus HFTV1 from head to tail
This structure of an archaeal tailed virus (arTV) provides detailed insights into arTV assembly and infection mechanisms.
www.science.org
Reposted by Utrecht Virology Lab
cryocloudio.bsky.social
CryoCloud is heading to Women in Electron Microscopy #WeM2025 this week!

We’re proud to sponsor this inaugural event supporting women in electron microscopy.

Our own @ievadr.bsky.social will speak on cloud-native automation to enable high-throughput #cryoEM for drug discovery.

See you there!
Reposted by Utrecht Virology Lab
danielhurdiss.bsky.social
Rounding off an incredibly busy week with the excellent third installment of the Dutch Structural Biology Meeting! Many thanks to Arjen for the kind invitation to present our lab’s work.
Reposted by Utrecht Virology Lab
olibclarke.bsky.social
Initial attempt at replicating in relion (parameters in next post). This is for Aca2-RNA, using a 100k subset of the 2D-classified particles (no prior 3D cleanup).

A 1-class ab initio in relion, then local refinement in relion (1.8deg searches+blush) gives a nominally 3.3Å map; 3.5 Å w/out blush.
Reposted by Utrecht Virology Lab
mhd-newcastle.bsky.social
Now we are on Bluesky, over the next couple of days we would like to introduce some of the MHD groups on Bluesky who you can follow for more research updates. Or check out our handy MHD starter pack 😀
go.bsky.app/SoVnvW3
Reposted by Utrecht Virology Lab
cryoempapers.bsky.social
The structure of the Human Adenovirus 7 virus-like particles reveals that pentons and core-genome promote hexon-pIIIa interactions during capsid maturation www.biorxiv.org/content/10.1101/2025.09.22.677823v1 #cryoem
Reposted by Utrecht Virology Lab
biorxiv-microbiol.bsky.social
Interactions between the 2C protein of FMDV and components of the viral replication machinery are mediated by ER-derived membranes https://www.biorxiv.org/content/10.1101/2025.09.17.676763v1
Reposted by Utrecht Virology Lab
pcavanderwel.bsky.social
Coming up next week: the third Dutch Structural Biology meeting! Now in Delft, on Sept 26. See program here: nvbmb.kncv.nl/biology-2025 with #teamtomo #cryoEM #nmrchat simulations and more (looks like)

Organized by the #NVBMB (associated with KNCV)
Dutch Structural Biology Meeting 2025 - NVBMB
nvbmb.kncv.nl
Reposted by Utrecht Virology Lab
danielhurdiss.bsky.social
Back from the 9th International Calicivirus Conference in Banff! Robin Veenstra and I really enjoyed both the stunning mountain views and the exciting science being shared in the field.

Thanks to the organisers for putting together this great meeting. Lots of exciting collaborations ahead!
Reposted by Utrecht Virology Lab
solidevidence.bsky.social
This is overdue. XFG* is the 11th world dominant lineage, and the first to hold the title since KP.3.1.1 a year ago.

Strangely, there are still a few corners of the world (particularly China) where it is almost completely absent.
Reposted by Utrecht Virology Lab
dbhella.bsky.social
Well this is terrible… honestly the stuff I have to do for science - in Banff for the 9th international Calicivirus workshop.
Reposted by Utrecht Virology Lab
danielhurdiss.bsky.social
In situ cryo-ET redefines HPV disassembly and transport paradigms

www.biorxiv.org/content/10.1...
www.biorxiv.org
Reposted by Utrecht Virology Lab
cryocloudio.bsky.social
August Map of the Month: Epitope Mapping edition!

We reprocessed EMD-19016 and got a 2.7 Å map of PDCoV RBD in complex with two neutralising Fabs ✨

📊 4,736 movies
⚡️ 35.5 h cloud compute
🔬 2.7 Å map from 120k particles (0.3 Å better than published)

📬 DM or [email protected] for more info!

#CryoEM
Reposted by Utrecht Virology Lab
lacarlson.bsky.social
Repost appreciated:
Open #PhDposition in structural virology in my group! Join us in Umeå, Sweden to uncover how arboviruses remodel infected cells. In situ #cryoET and #cryoEM combined with #virology, #cellbiology, and #biophysics.
Deadline 7 September. More info: www.carlsonlab.se/join/