#enhancer/promoter
Full article: Quantification of residual plasmid DNA and SV40 promoter-enhancer sequences in Pfizer/BioNTech and Moderna modRNA COVID-19 vaccines from Ontario, Canada www.tandfonline.com/doi/full/10....
Quantification of residual plasmid DNA and SV40 promoter-enhancer sequences in Pfizer/BioNTech and Moderna modRNA COVID-19 vaccines from Ontario, Canada
For some of the COVID-19 vaccines, the drug substances released to market were manufactured differently than those used in clinical trials. Manufacturing nucleoside-modified mRNA (modRNA) for comme...
www.tandfonline.com
December 18, 2025 at 1:15 AM
Epigenetics Update - JMJD2 regulates enhancer–promoter interactions via biomolecular condensate formation go.nature.com/45b2mTY

#Epigenetics #BiomolecularCondensates #JMJD2
#HistoneDemethylase #Chromatin
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Empower your research with high-res epigenetic insights at epigenometech.com
December 17, 2025 at 12:57 PM
Aberrant Gene Expression: Insertion near a regulatory element (e.g., promoter, enhancer) can alter the expression of nearby genes, leading to overexpression or silencing.
December 16, 2025 at 9:18 PM
During this deepening, stem-like cells progressively lose H3K27ac (active enhancer/promoter mark). We identified a new hallmark of quiescent stem-like cells in Nematostella! 7/12
December 16, 2025 at 5:08 PM
4. ECORDs are regulated by LINE-1 elements located in gene-distal regions that recruit both repressors and activators and may function as stage-specific silencer/enhancer modules. From LINE-1s, H3K9me2 spreads across ECORDs, repressing activation of promoter-proximal endogenous retroviruses (ERVs).
December 12, 2025 at 2:45 PM
Enhancer/Enhanceosome/Super-enhancer and the promoter-proximate RNA Polymerase II (Pol II) pausing are coupled https://www.biorxiv.org/content/10.64898/2025.12.10.693453v1
December 12, 2025 at 3:45 AM
Enhancer/Enhanceosome/Super-enhancer and the promoter-proximate RNA Polymerase II (Pol II) pausing are coupled https://www.biorxiv.org/content/10.64898/2025.12.10.693453v1
December 12, 2025 at 3:45 AM
A developmentally regulated long-range enhancer-promoter contact mediates human neural development https://www.biorxiv.org/content/10.64898/2025.12.01.691702v1
December 3, 2025 at 11:30 PM
A developmentally regulated long-range enhancer-promoter contact mediates human neural development https://www.biorxiv.org/content/10.64898/2025.12.01.691702v1
December 3, 2025 at 11:30 PM
Have you ever wondered how enhancers and gene promoters find each other? One possible explanation is the binding of enhancer RNA to target antisense promoter RNA. You can detect these non-coding RNA interactions using a relatively new biotechnology called in situ conformation sequencing (RIC-seq).
RIC-seq for global in situ profiling of RNA–RNA spatial interactions - Nature
RNA in situ conformation sequencing (RIC-seq) enables the generation of three-dimensional interaction maps of RNA in cells, which sheds light on the interactions and regulatory functions of RNA.
www.nature.com
December 2, 2025 at 6:49 AM
🔥 Tumor “mitochondria economy”: cancer cells import, refurbish & redistribute mitochondria to suppress immunity
🎨 CRISPR PRO-LiveFISH: image unique genomic loci live & enhancer–promoter loops
🧫 Brain tumors contain intracellular bacterial signals that shape local immune states
December 1, 2025 at 11:14 AM
(23) If you move SRR2 further than ~20kb from the Sox2 promoter, it cannot support cohesin-independent action of the distal enhancer.

~20kb was the cuttof we say at Car2 for cohesin-independent action of enhancers. Makes sense!
November 27, 2025 at 9:59 PM
(17) So it’s not that complicated in the end:

If you rely on an enhancer, you will need cohesin extrusion beyond ~18kb.

UNLESS you have a promoter-proximal regulatory element that can synergize with your distal enhancer – which happens independently of
November 27, 2025 at 9:59 PM
I'm guest-editing a collection on "Enhancer-promoter interactions" at Genome Biology. Please send us your exciting stories!

link.springer.com/collections/...
Enhancer-promoter interactions
Genome Biology is calling for submissions to our Collection on enhancer-promoter interactions. Enhancer–promoter interactions are central to the regulation ...
link.springer.com
November 25, 2025 at 10:55 AM
Enjoyed reading this discussion of how extrachromosomal DNA found in cancer might be inherited during cell division. It was known it needs to physically attach to chromosomes. It seems it does so by capturing enhancer or promoter sequences and mimicking enhancer:promoter contacts.
November 24, 2025 at 10:31 AM
Cohesin-CTCF loops and TADs are extensively implicated in enhancer-promoter communication, but the transcriptional changes after acute cohesin and CTCF removal are very modest, the regulated genes show minimal overlap, and the extent of enhancer involvement remains uncertain.
November 18, 2025 at 11:56 AM
Base-pair resolution Micro Capture-C ultra to map chromatin contacts between individual motifs within cis-regulatory elements and reveal a unified model of biophysically mediated enhancer-promoter communication @cellcellpress.bsky.social
www.cell.com/cell/fulltex...
November 6, 2025 at 3:03 AM
We identified hundreds of promoter- and enhancer-targeting CRISPRa gRNAs that upregulated 200 of the 337 NDD genes in human neurons, including 91 novel enhancer-gene pairs.
November 5, 2025 at 3:19 PM
homie and nhomie insulators compete with each other for interaction with distant copies, affecting enhancer-promoter interactions and eve function https://www.biorxiv.org/content/10.1101/2025.10.28.684994v1
October 28, 2025 at 8:36 PM
homie and nhomie insulators compete with each other for interaction with distant copies, affecting enhancer-promoter interactions and eve function https://www.biorxiv.org/content/10.1101/2025.10.28.684994v1
October 28, 2025 at 8:36 PM
Hong, M., Hong, J. W. (2025). Promoter strength delimits enhancer threshold in the early Drosophila embryo. Int J Dev Biol, 69(2):81-90 ijdb.ehu.eus/article/2402...
October 28, 2025 at 8:24 PM
Hong, M., Hong, J. W. (2025). Promoter strength delimits enhancer threshold in the early Drosophila embryo. Int J Dev Biol, 69(2):81-90 ijdb.ehu.eus/article/2402...
October 27, 2025 at 8:59 PM
Very cool. Need to read in detail - wonder how this plays into how many of us generate enhancer testing reporters that pair a candidate enhancer directly with a minimal promoter!
October 23, 2025 at 11:38 PM
Check out our new story on how broad enhancer inputs are restricted into tissue-specific gene expression 🧬
Hint: Promoter-proximal regions are the key!
October 16, 2025 at 4:53 PM