Alice Braun
@alicebraun.bsky.social
72 followers 97 following 5 posts
Statistical geneticist interested in complex traits @ripkelab.bsky.social and @broadinstitute.org 🧬⚔️ Professional dungeon master @home
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Reposted by Alice Braun
breunigsophie.bsky.social
Our project, looking at the genetic relationships between immune diseases and psychiatric disorders, has finally been published! Now with gene expression analyses as well as additional sensitivity analyses, thanks to reviewers. Find the full article here: www.nature.com/articles/s41...
Reposted by Alice Braun
floragraham.bsky.social
Wonderful thread about mentors. @nature.com ‘s mentorship award is open for noms now: www.nature.com/nature/award...
alicebraun.bsky.social
This is really cool :) I'd love to be a beta tester
alicebraun.bsky.social
The Ripke lab has worked on a new stable release of RICOPILI! Updates include compatibility with GRCh38 and imputation using Minimac4. A software tarball and YAML file are provided to help resolve dependency issues:
github.com/Ripkelab/ric...
Any feedback is highly welcome!
@pgcgenetics.bsky.social
GitHub - Ripkelab/ricopili: Main ricopili repo for public releases
Main ricopili repo for public releases. Contribute to Ripkelab/ricopili development by creating an account on GitHub.
github.com
Reposted by Alice Braun
erictopol.bsky.social
A tour de force review of the connections between between the nervous and immune systems
www.nature.com/articles/s41...
Reposted by Alice Braun
alicebraun.bsky.social
Congrats everyone!!!
pgcgenetics.bsky.social
1/n Our multi-ancestry #GWAS meta-analysis of major depression is now published in @cellpress.bsky.social.

www.cell.com/cell/fulltex...

A thread 🧵:
Article screenshot of a genome-wide association study of major depression published in the journal Cell
Reposted by Alice Braun
michelnivard.bsky.social
🚨 This will become a curated list of awesome tools for complex trait genetics, **add yours**! it may become a review in which case those who contribute are invited as co-authors.
GitHub - MichelNivard/awesome-complex-trait-genetics: A list of awesome tools for complex trait genetics.
A list of awesome tools for complex trait genetics. - MichelNivard/awesome-complex-trait-genetics
github.com
alicebraun.bsky.social
Really cool effort!

How about showing the MHC some love by adding HLA-TAPAS github.com/immunogenomi... and HATK github.com/WansonChoi/H...?

Although not really a post-GWAS tool: RICOPILI for QC and data processing (some much needed updates are underway): github.com/Ripkelab/ric...
GitHub - WansonChoi/HATK: A collection of modules to process and analyze IMGT-HLA sequences.
A collection of modules to process and analyze IMGT-HLA sequences. - WansonChoi/HATK
github.com
Reposted by Alice Braun
ripkelab.bsky.social
Thanks for the valued colleague award @pgcgenetics.bsky.social, which traveled all the way from Singapore to Berlin!
Reposted by Alice Braun
toddlencz.bsky.social
NOW HIRING
#postdocjobs
NIH funding for a #postdoc with interest in complex genetics / computation / analysis
#GWAS #rarevariants #polygenicriskscores
in multiple research contexts:
psychiatric genomics; cognitive genomics; embryo screening...
acnp.org/wp-content/u...
https://acnp.org/wp-content/uploads/2021/09/Postdoc_listing-_Lencz_polygenic.pdf…