Dr Dr Oona Snoeyenbos-West
@oonawest.bsky.social
1.8K followers 910 following 150 posts
Research Scientist: University of Arizona, Carini Lab. Co Founder, MycoMine 🍄‍🟫Environmental Microbiologist /Geomicrobiologist, First Gen Scientist 🇺🇸 Manifesting Microbes 🪄🦠🧫🪄💫
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oonawest.bsky.social
Interested in how Fungi are shaping the future of our planet? 🍄 🌍🌎🌏🍄‍🟫Check out the latest “The Future is Fungi podcast”featuring yours truly ! 👇🏻

open.spotify.com/episode/2ddA...
Mycoremediation and Its Fungal Powers with Dr. Oona Snoeyenbos-West
The Future is Fungi · Episode
open.spotify.com
Reposted by Dr Dr Oona Snoeyenbos-West
jcamthrash.bsky.social
Carbon source diversity shapes bacterial interspecies interactions academic.oup.com/ismej/advanc... #jcampubs
Reposted by Dr Dr Oona Snoeyenbos-West
jcamthrash.bsky.social
SAR11 ecotypes across ocean basins change with depth due to changes in light and oxygen academic.oup.com/ismej/advanc... #jcampubs 🌊
Reposted by Dr Dr Oona Snoeyenbos-West
jcamthrash.bsky.social
Automated environmental metagenomics using Oxford nanopore sequencing bmcgenomics.biomedcentral.com/articles/10.... #jcampubs
Automated environmental metagenomics using Oxford nanopore sequencing - BMC Genomics
Background Long-read sequencing has revolutionised metagenomics through improved metagenome assembly, taxonomic classification and functional characterisation. Automation can enhance the throughput, reproducibility, and accuracy of library preparation. However, the validation of automated library preparation protocols remains undetermined for metagenomic workflows, which are particularly sensitive to methodological perturbation. Here, we compare long-read metagenomic sequencing of environmental samples through parallel manual and automated protocols. Results Although automated library preparation led to minor reduction in read and contig lengths, taxonomic classification rate and alpha diversity was slightly higher than manual libraries, including the detection of more rare taxa. Despite this, no significant difference in microbial community structure was identified between manual and automated libraries. Conclusions Despite minor differences in sequencing and classification metrics, automated and manual library preparation resulted in comparable characterization of environmental community metagenomes. These findings demonstrate the suitability of automation for high-throughput long-read metagenomics, with broad applicability to automated long-read sequencing for improved efficiency and reproducibility.
bmcgenomics.biomedcentral.com
Reposted by Dr Dr Oona Snoeyenbos-West
jcamthrash.bsky.social
Extracellular electron transfer in cable bacteria enables growth rates comparable to aerobic respiration www.biorxiv.org/content/10.1... #jcampubs
Reposted by Dr Dr Oona Snoeyenbos-West
coreyspowell.bsky.social
Astronomers have detected a dark blob of...something, billions of light years away. It's as massive as a million Suns & it emits no detectable radiation.

It might be a clump of dark matter, revealing new details about the structure of the invisible universe. 🧪🔭

www.ucdavis.edu/news/astrono...
Left, our best surface brightness model of the 1.7-GHz global VLBI observation used here, which has been reconvolved with the main lobe of the interferometer’s point spread function and added to the residuals (34 μJy per beam r.m.s.). For reference, red contours show the surface brightness at 2.1 μm observed by the W. M. Keck Observatory adaptive optics system30. The positions of two low-mass perturbers are each marked with a black X. The 2 × 108 M⊙ object first detected by ref. 24 is labelled , and the 1.13 × 106 M⊙ detection reported here is labelled . The zoomed-in region shown in the right-hand two panels is indicated by the black square, which has a side length of 60 mas. Top right, detail of the bright arc around , with the colour scale modified to emphasize the gap in the arc produced by the gravitational perturbation of . Bottom right, GI corrections to the lensing convergence (expressed in units of lens-plane surface mass density), showing a compact, positive feature whose position and mass are consistent with the independent parametric modelling results for . The dashed black circle has a radius of 80 pc and the lensed emission is indicated by the black contours.
Reposted by Dr Dr Oona Snoeyenbos-West
drkeithsmith.bsky.social
How can we tell what's inside an #exoplanet? @timlichtenberg.bsky.social et al review how a planet's atmosphere interacts with its interior. Atmospheric observations can distinguish between lava worlds, water worlds, temperate surfaces or supercritical interiors. ☄️
www.science.org/doi/10.1126/...
Reposted by Dr Dr Oona Snoeyenbos-West
profannawatts.bsky.social
Lol the Nobels can't even acknowledge women's contribution to discovery. But sure let's acknowledge The Machines.
Headline from an article in Nature this week that states "Prizes must recognize machine contributions to discovery. The future of science will be written by humans and machines together. Awards should reflect that reality."
Reposted by Dr Dr Oona Snoeyenbos-West
thecovidinfoguy.bsky.social
Brainstem damage found to be behind long-lasting effects of severe Covid-19.

"Using ultra-high-resolution scanners that can see the living brain in fine detail, researchers from the Universities of Cambridge and Oxford were able to observe the damaging effects Covid-19 can have on the brain."
Brainstem damage found to be behind long-lasting effects of severe Covid-19
Damage to the brainstem - the brain's 'control center' - is behind long-lasting physical and psychiatric effects of severe Covid-19 infection, a study suggests.
www.news-medical.net
Reposted by Dr Dr Oona Snoeyenbos-West
danielketter.com
Oh my God is the future really overly long emails with bolded words, bullet points and topical organizing emoji because everybody is using ChatGPT to write emails. Please, people should be embarrassed to do this, shame them.
oonawest.bsky.social
I concur! 😋
msrobinhosking.bsky.social
The humble baked spud with a super crispy skin is one of the finest dishes known to mankind
Reposted by Dr Dr Oona Snoeyenbos-West
katharinehayhoe.com
This week, we lost one of the world’s greatest advocates for people and nature. Even in her final days, Dr. Jane Goodall was urging us not to give up, and now her legacy lives on through the countless voices she inspired.

Read on Mailchimp: shorturl.at/lDxXk
Read on LinkedIn: shorturl.at/VOiPa
Jane Goodall's final lesson
Honoring Jane Goodall's life, Pope Leo's first climate address, and finding hope in action
www.talkingclimate.ca
Reposted by Dr Dr Oona Snoeyenbos-West
astronomy.bsky.social
A newborn world caught in the act. NASA’s new image shows WISPIT 2b, a baby planet forming inside a ring of gas and dust around its star. It’s the first-ever photo of its kind, offering a rare glimpse into planetary birth.

Credit: NASA/ESA/CSA
A newborn world caught in the act.  NASA’s new image shows WISPIT 2b, a baby planet forming inside a ring of gas and dust around its star. It’s the first-ever photo of its kind, offering a rare glimpse into planetary birth. 

Credit: NASA/ESA/CSA
oonawest.bsky.social
Gotta love those high GC genomes! 👌🏻
oonawest.bsky.social
It’s like the projected warming maps   where southern AZ is the only place in the lower 48 not getting warmer 🤷‍♀️
oonawest.bsky.social
💯👌🏻
uncultured.carinilab.com
One of the biggest things I truly love about Arizona is that we do not partake in the clock tomfoolery twice a year.
pnas.org
Switching the clocks twice a year hurts Americans' health. A modeling study of county-level solar light patterns, time policy, health data, and circadian models suggests a permanent shift to Standard Time would reduce obesity and strokes. In PNAS: www.pnas.org/doi/10.1073/...
Reposted by Dr Dr Oona Snoeyenbos-West
uncultured.carinilab.com
Neat paper!

Way back when, we speculated SAR11 could assimilate glycolate by oxidizing to glyoxylate and slapping an ammonia on it to produce glycine. Perhaps other taxa assimilate it similarly.
www.nature.com/articles/ism...
oonawest.bsky.social
Wow! What an amazing opportunity!
jomcinerney.bsky.social
The job is still open. Get your application in ASAP. Or just pass it on to somebody that might be interested.
jomcinerney.bsky.social
OK, here it is. Come work with me at the University of Liverpool making ALL THE AI models from ALL THE prokaryote pangenome data. Heck, we will make models from ALL the pangenomes, even eukaryotes!!! (link below👇) 1/4
Reposted by Dr Dr Oona Snoeyenbos-West
viromegirl.bsky.social
We're hiring for several positions (a post-bac researcher in #transcriptomics, a #phage #postdoc, a senior researcher (broad topics) and a graduate student to work on #ciliates) - find info here: www.marine.usf.edu/genomics/app...
Apply - Genomics
www.marine.usf.edu
Reposted by Dr Dr Oona Snoeyenbos-West
davidbrace2.bsky.social
"6 of flies", ink, watercolour, oil on watercolour paper, 5 1/4 x 7 1/4", 2025 - $150(Cdn) #art #sciart
A small painting of 6 dead house flies arranged in 2 columns and 3 rows of 2.