Volker Boehm
@volkerboehm.bsky.social
170 followers 300 following 1 posts
RNA-centric Staff Scientist | Nonsense-mediated decay | Exon junction complex | RBPs | Gehring Lab @ University of Cologne 🧫 https://orcid.org/0000-0001-7588-9842
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Reposted by Volker Boehm
fransupek.bsky.social
🛑Guille's @guillepalou.bsky.social no-nonsense 😉 paper is out in @springernature.com Genome Biology!

We report variable activity of the NMD pathway (mRNA QC) across tissues & individuals:

🧠less active in the nervous system & in reproductive tissues
🩸more active in digestive tract, muscle, blood
Reposted by Volker Boehm
johntngo.bsky.social
🚀 Our new paper is out @natmethods.nature.com!

Kuffer & Marzilli engineered conditionally stable MS2 & PP7 coat proteins (dMCP & dPCP) that degrade unless bound to RNA, enabling ultra–low-background, single-mRNA imaging in live cells.

🔗 www.nature.com/articles/s41...
🧬 www.addgene.org/John_Ngo/
Reposted by Volker Boehm
juliusbrennecke.bsky.social
wrong bioRxiv link here, sorry.

the correct link to the collaboration with Torben and Clemens is:
www.biorxiv.org/content/10.1...
Reposted by Volker Boehm
unicologne.bsky.social
The team of Prof. Dr Niels Gehring @volkerboehm.bsky.social records a comprehensive database that records systematically which genes and gene variants are directly affected by "Nonsense-mediated mRNA Decay" which opens up new avenues for RNA and genome research.
The database ➡️ nmdrht.uni-koeln.de
NMDRHT v1.2
nmdrht.uni-koeln.de
Reposted by Volker Boehm
crc1678.bsky.social
🥳 Congratulations from #CRC1678 to @volkerboehm.bsky.social and the Gehring lab for their publication in @cp-molcell.bsky.social on how “Rapid UPF1 depletion illuminates the temporal dynamics of the NMD-regulated human transcriptome” 🧬🧫
Reposted by Volker Boehm
unicologne.bsky.social
🎉 Congratulations to our new Vice-Rector for Research, Professor Dr. Carien Niessen! 🙌

The University Council has elected Professor Niessen as Vice-Rector for Research to support the advancement of excellent research at the #UniCologne. 🎓

Read more 👇
uni.koeln/9FCEC
@cecad.bsky.social
Carien Niessen elected new Vice-Rector for Research at the University of Cologne
The University Election Assembly elected Professor Dr Carien Niessen for the office of Vice-Rector for Research. The cell biologist is particularly committed to promoting excellent research at the uni...
uni.koeln
Reposted by Volker Boehm
Reposted by Volker Boehm
cp-trendsgenetics.bsky.social
"m6A in the coding sequence: linking deposition, translation and decay"
by Kathi Zarnack (@zarnack-group.bsky.social) & colleagues

"This review explores [m6A in] mRNA decay, with a focus on the newly discovered CDS–m6A decay (CMD) pathway..."

Read it here:
authors.elsevier.com/sd/article/S...
Figure 2. Overview of N6-methyladenosine (m6A) decay pathways. m6A acts as a destabilizing mark on mRNA.
Reposted by Volker Boehm
gencodegenes.bsky.social
The latest human GENCODE releases for Human (49) and Mouse (M38), have just been released. They're available via gencodegenes.org and visible in @ensembl genome browser as part of Ensembl 115 ensembl.org
GENCODE - Home page
gencodegenes.org
Reposted by Volker Boehm
jgezelle.bsky.social
Our study from the Steckelberg lab is out now in @narjournal.bsky.social !! We dove into a new nuclease-blocking viral #RNA structure important for viral infection, which provided evidence of similar structure-based strategies across diverse viral families. academic.oup.com/nar/article/...
A conserved viral RNA fold enables nuclease resistance across kingdoms of life
Abstract. Viral exoribonuclease-resistant RNA (xrRNA) structures block cellular nucleases to produce subgenomic viral RNAs during infection. High sequence
academic.oup.com
Reposted by Volker Boehm
mirimiam.bsky.social
🚨🚨🚨

Please RT!

We're looking for a postdoc to join an exciting joint project between our lab @upf.edu & @crg.eu (Barcelona) and the Sander lab @mdc-berlin.bsky.social (Berlin) investigating how alternative splicing and microexons influences the maturation of pancreatic islets.

Deadline: 30/09/25👇
www.upf.edu
Reposted by Volker Boehm
muellerrom.bsky.social
1/ 🧬 Exciting news! Our group just published a paper in Nature Communications on using serum proteomics to predict disease progression in #ADPKD (Autosomal Dominant Polycystic Kidney Disease) 🔬 — enhancing risk stratification beyond currently available models 🎯 rdcu.be/exbNq
Developing serum proteomics based prediction models of disease progression in ADPKD
Nature Communications - Autosomal dominant polycystic kidney disease (ADPKD) is characterized by progressive cyst formation and loss of kidney function, yet prognostic biomarkers remain limited....
rdcu.be
Reposted by Volker Boehm
oxfordrnaclub.bsky.social
Hi #RNAsky, #ChromatinSky!
It is a pleasure to announce that the @ox.ac.uk RNA & transcription club is now on Bluesky. Follow us to stay in touch with everything RNA and transcription from gene regulation to disease. Join us here: rna.web.ox.ac.uk/home
Home
rna.web.ox.ac.uk
Reposted by Volker Boehm
uni-wuerzburg.de
Congratulations to our biochemistry professor Utz Fischer: he has been elected to @embo.org ! His research focuses on the macromolecular machines of the cell. 📷 Christoph Weiss www.uni-wuerzburg.de/en/news-and-...
Reposted by Volker Boehm
versteegga.bsky.social
Our latest study is now out in @narjournal.bsky.social‬: we identify a post-transcriptional bottleneck in interferon gamma signaling that hinges on proper maturation of JAK2 mRNA.
Paper: academic.oup.com/nar/article/...
Reposted by Volker Boehm
maxperutzlabs.ac.at
🆕 publication! Cells don’t just fight infection - they fine-tune their immune response. A new study from the Versteeg lab in @narjournal.bsky.social led by Adrian Söderholm uncovers how RNA processing of JAK2 helps regulate immune signals ➡️ tinyurl.com/2py27c8u
@univie.ac.at
@meduniwien.ac.at
Reposted by Volker Boehm
shechnerlab.bsky.social
Hello! Ever wonder what's "talking to" your favorite transcript, but were too scared to ask? In our review in @cp-cellreports.bsky.social, @mardakheh.bsky.social and I highlight new RNA-focused tools for discovering RNA interactions across organizational scales. Checkit!

tinyurl.com/ydn6e3ac