Karsten Suhre
@ksuhre.bsky.social
1.5K followers 2.9K following 100 posts
Passionate about #GWAS #Metabolomics #Proteomics #Glycomics #Epigenomics, Professor @WeillCornell Medicine - Qatar, Blog on http://metabolomix.com, http://suhre.fr
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ksuhre.bsky.social
Interested in joint multiomics data?

Metabolon, Biocrates, Lipidyzer, Chenomx, SOMAscan, Olink, Nightingale, Genos, Exiqon and Illumina genomics (OmniArray, HumanMethylation, RNAseq)

Check out our COMICS server

littleswissriver.shinyapps.io/generate_net...

and BLOG

www.metabolomix.com/comics/
Reposted by Karsten Suhre
wcmenglanderipm.bsky.social
“Our study [in Cancer Discovery] suggests a new therapeutic approach to block metastasis before it starts, and help patients overcome triple negative breast cancer,” said Dr. Vivek Mittal (@MittalLab) from the Meyer Cancer Center and there EIPM.

news.weill.cornell.edu/news/2025/10...
Reposted by Karsten Suhre
qatarproteomics.bsky.social
🔬Inside the Core Lab: Driving Discovery in #Proteomics
Explore one of the key labs supporting cutting-edge proteomics research in Qatar. Meet the team and discover the advanced technologies driving biomedical breakthroughs.

Featured in the lead-up to #QPC2025 — where innovation meets collaboration.
ksuhre.bsky.social
This Report outlines research Recommendations from the NIDDK’s Working Group of Council on Heterogeneity of #Diabetes, a result of tremendous effort and significant contributions from global investigators and #NIDDK staff.

www.niddk.nih.gov/about-niddk/...
Heterogeneity of Diabetes - NIDDK
This Report outlines research Recommendations from the NIDDK’s Working Group of Council on Heterogeneity of Diabetes.
www.niddk.nih.gov
Reposted by Karsten Suhre
lipidmaps.bsky.social
October's #LipidoftheMonth is a sterol that might be causing quite a buzz soon.
www.lipidmaps.org/updates/lipi...
ksuhre.bsky.social
Great initiative… Unfortunately I can already see all kinds of IRB and MTA paperwork around sharing and shipping these samples around. Have seen too much of this lately. Feels like the central aim of doing research these days is being compliant. But maybe I am overly pessimistic.
ksuhre.bsky.social
"A standardized framework for circulating
blood proteomics" ... it summarizes many of the challenges encountered in the field, although I miss any reference to genetic aspects of blood proteomics, i.e. cis-pQTLs to confirm target specificity and epitope effects

www.nature.com/articles/s41...
A standardized framework for circulating blood proteomics
Nature Genetics - The field of blood proteomics faces an upsurge of data with the challenge of cross-study comparisons. This Perspective offers an in-depth analysis and proposes reference materials...
www.nature.com
ksuhre.bsky.social
I have always been a proponent of hypothesis-free testing of metabolite rations: This paper is just great in how it takes it to the next level:

Untargeted pixel-by- pixel metabolite ratio imaging as a novel tool for biomedical discovery in mass spectrometry imaging

elifesciences.org/articles/96892
Reposted by Karsten Suhre
ericfauman.bsky.social
Years ago I asked on Twitter why my heart rate would continue to climb even after I fixed the speed and incline on my treadmill. At the time, no one on Twitter could give me a satisfactory answer.
But now GPT4o was able to answer it and suggested approaches to quantify the phenomenon.
Reposted by Karsten Suhre
kkmurray.bsky.social
(J Proteom Res) [ASAP] Understanding Data Analysis Steps in Mass-Spectrometry-Based Proteomics Is Key to Transparent Reporting: Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.5c00287 #MassSpecRSS
[ASAP] Understanding Data Analysis Steps in Mass-Spectrometry-Based Proteomics Is Key to Transparent Reporting
Journal of Proteome ResearchDOI: 10.1021/acs.jproteome.5c00287
dlvr.it
Reposted by Karsten Suhre
Reposted by Karsten Suhre
jessicamablair.bsky.social
Come and work with us!! 🤩
alanmcn1.bsky.social
We have a position for an Assist Prof in Microbial Genomics in our School of III.

Hod Joan Geoghegan will be happy to field questions if you are interested. No specific area of microbial genomics preferred so please do consider it

www.jobs.ac.uk/job/DOO184/a...
Assistant Professor (Research and Education) in Bacterial Genomics at University of Birmingham
Apply now for the Assistant Professor (Research and Education) in Bacterial Genomics role on jobs.ac.uk - the leading job board for higher education jobs. View details.
www.jobs.ac.uk
Reposted by Karsten Suhre
Reposted by Karsten Suhre
darraghobrien.bsky.social
Fantastic start to the day here at the 3rd "Human Proteome and Health" Symposium at Rhodes House where Dr Katerina Gospodinova from the ARUK-ODDI and @cmd.ox.ac.uk discussed proteomic profiling of the #matrisome for use a novel therapeutic modality in #Alzheimers Disease 🧠 @arukthamesv.bsky.social
Reposted by Karsten Suhre
Reposted by Karsten Suhre
sinzandrea.bsky.social
‼️ Job alert 🚨: I have an open 3-year postdoc position in my lab to develop novel crosslinking mass spectrometry workflows. 🧪🧪 So if you want to do cool stuff in protein MS, please apply ! ⬇️ Please RT
www.verwaltung.uni-halle.de/dezern3/Auss...

#Academicsky
#Chemsky
#teammassspec
www.verwaltung.uni-halle.de
Reposted by Karsten Suhre
kauralasoo.bsky.social
I'm pretty sure this must be due to a underlying large-effect methylation QTL.
ksuhre.bsky.social
Yes, that’s exactly what happens. We showed that for each of these cpg sites there is a genetic variant to be found within 1MB that explains them, so how does this function? And what does it mean in particular for the hypothesis of non-horizontal pleiotropy in MR with methylation as exposure?
ksuhre.bsky.social
Did you know that DNA methylation can show Mendelian inheritance pattern?

clinicalepigeneticsjournal.biomedcentral.com/articles/10....