Lightnews — Scholar-powered news

Lukas Käll @lukaskall.bsky.social · 21h

There is a position open in our lab, within this network. Our project deals with assessing identification and quantification errors for MS-based proteomics. www.protaiomics.eu/project/dc13...
Please check out all the project descriptions at the site below:

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Reposted by Lukas Käll

EuBIC-MS @eubic-ms.org · 5d

Last week we had our yearly organizational meeting, this time in Vienna, Austria. We had 3 great days discussing the activities of the past year and planning the upcoming ones. Thanks to everyone who joined and contributed to a great meeting!

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Reposted by Lukas Käll

protaiomics.bsky.social @protaiomics.bsky.social · 6d

🌟 Great Opportunity!
The ProtAIomics Doctoral Network (ProtAIomics-DN) is launching soon!

💡 We are offering 16 fully funded PhD positions to shape the future of AI-driven proteomics research.

👉 Stay tuned for updates!
#PhD #Proteomics #ArtificialIntelligence #MSCA #HorizonEurope #PhDOpportunities

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Reposted by Lukas Käll

Arne Elofsson @bioinfo.se · 9d

Come work with me. Excellent startup package. su.varbi.com/en/what:job/...

Assistant Professor in Data-driven cell and molecular biology

At Stockholm University the Department of Biochemistry and Biophysics (DBB) and the Department of Molecular Biosciences, The Wenner-Gren Institute (MBW) are looking to fill one position as DDLS fellow

su.varbi.com

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Reposted by Lukas Käll

Savitski Lab @savitski-lab.bsky.social · Aug 20

So grateful and honored to receive the MCP Lectureship Award at the #ASBMBProteomics meeting at the Broad Institute! Huge thanks to the wonderful organizers and to everyone—past and present—who’s been part of our lab.

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Reposted by Lukas Käll

EMBL-EBI @ebi.embl.org · Aug 13

Recruitment is now open for the EMBL-EBI–Sanger Postdoctoral Programme.

ESPOD builds on the collaborative relationship between EMBL-EBI and the @sangerinstitute.bsky.social, offering projects that combine experimental and computational approaches.

www.ebi.ac.uk/research/pos...

🧬🖥️🔬#postdocjob

ESPOD, the EMBL-EBI/Sanger postdoctoral fellowship. Applications deadline 30 September. Image credit: Karen Arnott / EMBL-EBI

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Lukas Käll @lukaskall.bsky.social · Aug 13

The last day for registering for the Nordic Conference in Mass Spectrometry and Proteomics 2025 in Odense, Denmark, 1-3rd September 2025, is closing in. Please sign up before Friday!
www.nordicmsp2025.com

Nordic MSP 2025 – Mass Spectrometry & Proteomics Conference in Odense

Join leading scientists at Nordic MSP 2025 at ODEON in Odense, Denmark. A premier conference on mass spectrometry and proteomics.

www.nordicmsp2025.com

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Reposted by Lukas Käll

Jason Moore @moorejh.bsky.social · Jun 14

I heard this morning that my informatics colleague Dr. Atul Butte passed after a battle with cancer. He was a giant in the field & inspired many of us over his distinguished career. He was a passionate champion of the power of big data & his impact on our field is immeasurable. RIP Atul & thanks.

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Reposted by Lukas Käll

ypic.bsky.social @ypic.bsky.social · May 29

Wondering about the next step in your proteomics career? Curious to know how proteomics experts ended up at their current positions? Looking for tips to help you discover what you really like? Join our Meet-the-Expert session! Wednesday, June 18th | 12:30 - 13:30 Vauban 2 #EuPA2025 #EuPAFPS2025

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Reposted by Lukas Käll

Kevin Drew @ksdrew.bsky.social · May 29

Very excited that our work describing hu.MAP3.0 is published in @molsystbiol.org. Here we use machine learning to integrate >25k mass spectrometry experiments to place ~70% of human proteins into 15k protein complexes.

www.embopress.org/doi/full/10....

hu.MAP3.0: atlas of human protein complexes by integration of >25,000 proteomic experiments | Molecular Systems Biology

imageimagehu.MAP3.0 integrates mass spectrometry experiments to identify human protein complexes. Using this resource, this study characterizes covariation of complexes, identifies mutually exclusive ...

www.embopress.org

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Reposted by Lukas Käll

Sean Eddy @cryptogenomicon.bsky.social · May 22

NIH funding supporting the HMMER and Infernal software projects has been terminated. NIH states that our work, as well as all other federally funded research at Harvard, is of no benefit to the US.

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Reposted by Lukas Käll

wnoble.bsky.social @wnoble.bsky.social · May 22

Interested in prediction tasks involving peptide mass spectra? Our foundation model uses pre-trained spectrum representations learned by a de novo sequencing model to solve many tasks better and with less data, from recognizing chimeras to separating N- and O-glycopeptides. arxiv.org/abs/2505.10848

Foundation model for mass spectrometry proteomics

Mass spectrometry is the dominant technology in the field of proteomics, enabling high-throughput analysis of the protein content of complex biological samples. Due to the complexity of the instrument...

arxiv.org

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Reposted by Lukas Käll

Arne Elofsson @bioinfo.se · May 26

Come work with me an Sarah and become a part of DDLS danaher.wd1.myworkdayjobs.com/CytivaJobsPP...

Industry PhD position in Computational Protein Design

We are looking for a motivated PhD student to join us in a unique, collaborative project between our Affinity Ligand Design team at Cytiva and the Elofsson group at Stockholm University, where we will...

danaher.wd1.myworkdayjobs.com

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Reposted by Lukas Käll

European Research Council (ERC) @erc.europa.eu · May 19

Are you based in the U.S. 🇺🇸 or Canada 🇨🇦 and thinking of doing research in Europe?

ERC grants offer up to €4.5 million to support groundbreaking, investigator-driven frontier research in all fields.

Watch the dedicated info session for researchers in your region👉 youtu.be/92QYink1Lik

#ChooseEurope

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Reposted by Lukas Käll

Knut and Alice Wallenberg Foundation @kawresearch.bsky.social · May 15

#Proteins build our cells send signals and transport substances They will only work if they attain their exact 3-dimensional form Gunnar von Heijne is demonstrating at a previously inconceivable level of detail how protein folding is achieved @stockholm-uni.bsky.social #science
tinyurl.com/53n9s4nv

Close-up images of protein folding | Knut and Alice Wallenberg Foundation

Proteins are the building blocks of life. They build our cells, send signals and transport substances. But they will only work correctly if they attain their exact 3-dimensional form. Gunnar von Heijn...

tinyurl.com

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Reposted by Lukas Käll

Jeremy Berg @jeremymberg.bsky.social · Apr 28

Here is the link to the Last Week Tonight with John Oliver about RFK, Jr, public health, and HHS (including NIH)

www.youtube.com/watch?v=8H34...

RFK Jr. & HHS: Last Week Tonight with John Oliver (HBO)

YouTube video by LastWeekTonight

www.youtube.com

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Reposted by Lukas Käll

SciLifeLab @scilifelab.se · Apr 28

(1/2) “It’s fantastic that all this expertise exists in Sweden and I’m thrilled to have brought this team together” says @delemottelab.bsky.social who leads a project with researchers from 5 universities, aiming to develop a new strategy for designing drug molecules targeting #IonChannels 🧪
#MolBiol

SciLifeLab researcher and KTH Professor Lucie Delemotte sitts behind a microscope.

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Reposted by Lukas Käll

PastelBio @pastelbio.bsky.social · Apr 24

Open-Source and FAIR Research Software for Proteomics pubs.acs.org/doi/10....

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#proteomics #prot-paper

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Reposted by Lukas Käll

Knut and Alice Wallenberg Foundation @kawresearch.bsky.social · Apr 22

Membrane proteins are the primary target of many drugs These proteins play a key role in regulating the body’s functions and communication between cells Erik Lindahl @stockholm-uni.bsky.social is developing new methods to study these proteins in situ in tissue #research #science
tinyurl.com/mr3j5rmf

Striving to improve understanding of signaling in the nervous system | Knut and Alice Wallenberg Foundation

Membrane proteins are the primary target of many drugs. These proteins play a key role in regulating the body’s functions and communication between cells. Wallenberg Scholar Erik Lindahl is developing...

tinyurl.com

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Reposted by Lukas Käll

Nikolai Slavov @slavov-n.bsky.social · Apr 5

The JPR issue on Single-Cell Omics is out.

As the editorial highlights, understanding biological systems requires direct measurements at all molecular levels.

Unlocking the Potential of Single-Cell Omics
pubs.acs.org/doi/10.1021/...

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Reposted by Lukas Käll

Christian Broberger @broberger.bsky.social · Apr 3

Spread the news! Grants available to recruit scientists from outside of Europe to Sweden 🇸🇪 🧠
Please re-post.

New grant for recruiting researchers active outside Europe

In mid-April, the Swedish Research Council will issue a call for grants of 2 million SEK to enable Swedish higher education institutions and other research organisations to recruit prominent researche...

www.vr.se

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Reposted by Lukas Käll

Chris Ashwood @cashwood.proteaglyco.com · Mar 13

Here’s the link to the perspective:
pubs.acs.org/doi/full/10....

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Reposted by Lukas Käll

Rikard Enberg @rikardenberg.bsky.social · Mar 7

Här är en annan, nyare, och argsintare, text om detta defector.com/neither-elon...

Neither Elon Musk Nor Anybody Else Will Ever Colonize Mars | Defector

Mars does not have a magnetosphere. Any discussion of humans ever settling the red planet can stop right there, but of course it never does. Do you have a low-cost plan for, uh, creating a gigantic ac...

defector.com

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Reposted by Lukas Käll

SciLifeLab @scilifelab.se · Mar 3

"Gunnar von Heijne is demonstrating at a previously inconceivable level of detail how protein folding is achieved". Read the @kawresearch.bsky.social feature here ↓ 🧪

kaw.wallenberg.org/en/research/...

Gunnar von Heijne is a SciLifeLab researcher & @stockholm-uni.bsky.social Professor.

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Reposted by Lukas Käll

Erik Lindahl @eriklindahl.bsky.social · Feb 14

We have a great diverse research team at Science for Life Laboratory in Stockholm, and we will also be announcing several infrastructure staff positions in computing and AI applications as part of the national computational infrastructure www.naiss.se!

NAISS | The National Academic Infrastructure for Supercomputing in Sweden

The National Academic Infrastructure for Supercomputing in Sweden

www.naiss.se

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