Antonio Torres-Méndez
@antoniotorm.bsky.social
220 followers 390 following 1 posts
Neuroscience | Evolution | RNA | 🐛🪰 MSCA Fellow in the Neural Circuits and Evolution lab @thecrick.bsky.social 🍉🏳️‍🌈 he/him
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Reposted by Antonio Torres-Méndez
Reposted by Antonio Torres-Méndez
carlesbosch.bsky.social
Join us *next Monday*!
#CrickXrays25
X-ray #nanoimaging of biological tissues

🇬🇧🌐 @crick.ac.uk & online
tinyurl.com/crickxrays25

Sponsored by @dectris.bsky.social, @webknossos.org and @biologists.bsky.social and backed by @brukercorporation.bsky.social and Histomography
Reposted by Antonio Torres-Méndez
adamjkucharski.bsky.social
Results so stunningly clear they inspired this classic xkcd (xkcd.com/2400/):
Reposted by Antonio Torres-Méndez
dbenzinger.bsky.social
Super excited that our latest work is out!

We use optogenetics to dynamically control and study the formation of morphogen gradients.

If you are interested in optogenetic tools and/or how cells shape and process extracellular signals, check out @jamesbriscoe.bsky.social's thread and the paper.
jamesbriscoe.bsky.social
Our latest: We developed a chemo-optogenetic system for precise spatiotemporal control of morphogen production. Using dual light + small molecule control of Sonic Hedgehog production, we recapitulated neural tube patterning in vitro & measured spread of Shh

🧵

www.sciencedirect.com/science/arti...
Investigating morphogen and patterning dynamics with optogenetic control of morphogen production
Morphogen gradients provide the patterning cues that instruct cell fate decisions during development. Here, we establish an optogenetic system for the…
www.sciencedirect.com
Reposted by Antonio Torres-Méndez
gugunderwater.bsky.social
Had time to finish another Aliens dive’s memory card from May 6&8, 2024.
1) #Phronima with behbehies in a fantastically-colored salp
2/3) #Siphonophore (don’t lick)
4) #Ctenophore
5) #Swordfish
6) #Polychaete worm
7) #Scaleworm
8) Ctenophore
9) #MantisShrimp
Reposted by Antonio Torres-Méndez
carlbergstrom.com
1. The philosophy of science sometimes gets an unearned reputation as a purely academic exercise that offers little by way of concrete tools for advancing research.

This is wrong.

And today, as we grapple with how AI is changing the nature of scientific activity, it's desperately wrong.
Reposted by Antonio Torres-Méndez
nickdesnoyer.bsky.social
To promote the collection, I’ve launched a designer clothing line where synthetic biology meets aesthetics.

I will give out 100 free limited edition shirts to the first who retweet and order with their handle in the name! Available here → nickdesnoyer.com 🧵(6/7)
Reposted by Antonio Torres-Méndez
flor-iacaruso.bsky.social
1/N What are the organizational principles underlying crossmodal cortical connections?
We address this in this new preprint, led by @alexegeaweiss.bsky.social & ‪@bturner-bridger.bsky.social‬ in collab w/ ‪@petrznam.bsky.social‬ @crick.ac.uk
www.biorxiv.org/content/10.1...
Reposted by Antonio Torres-Méndez
jmbecologist.bsky.social
There are 5 key drivers of biodiversity loss

Climate change; Land/Sea use change; Invasives; Over-exploitation; Pollution

Importantly, they interact synergistically to exacerbate nature degradation

So don’t dismiss any individual driver as being of lesser importance
doi.org/10.1002/fee....
Reposted by Antonio Torres-Méndez
mjmoglie.bsky.social
We developed a compact and open-source, low-cost photodetector system for neuroscience experiments doi.org/10.1016/j.oh... @flor-iacaruso.bsky.social
Reposted by Antonio Torres-Méndez
kamounlab.bsky.social
I just published: Stop displaying journal names on your slides

A mentoring event at a Congress called for better support of early-career scientists - but what followed sent mixed signals. This blog reflects on those moments and ends with a pledge.

medium.com/p/stop-displ...
Stop displaying journal names on your slides
A mentoring event at a scientific Congress called for better support of early-career scientists — but what followed sent mixed signals…
medium.com
Reposted by Antonio Torres-Méndez
christinemayr.bsky.social
New paper:
More than 2700 human 3′UTRs are highly conserved. These 3′UTRs are essential components in mRNA templates, as their deletion decreases protein activity without changing protein abundance. Highly conserved 3′UTRs help the folding of proteins with long IDRs.

www.biorxiv.org/content/10.1...
mRNA 3′UTRs chaperone intrinsically disordered regions to control protein activity
More than 2,700 human mRNA 3′UTRs have hundreds of highly conserved (HC) nucleotides, but their biological roles are unclear. Here, we show that mRNAs with HC 3′UTRs mostly encode proteins with long intrinsically disordered regions (IDRs), including MYC, UTX, and JMJD3. These proteins are only fully active when translated from mRNA templates that include their 3′UTRs, raising the possibility of functional interactions between 3′UTRs and IDRs. Rather than affecting protein abundance or localization, we find that HC 3′UTRs control transcriptional or histone demethylase activity through co-translationally determined protein oligomerization states that are kinetically stable. 3′UTR-dependent changes in protein folding require mRNA-IDR interactions, suggesting that mRNAs act as IDR chaperones. These mRNAs are multivalent, a biophysical RNA feature that enables their translation in network-like condensates, which provide favorable folding environments for proteins with long IDRs. These data indicate that the coding sequence is insufficient for the biogenesis of biologically active conformations of IDR-containing proteins and that RNA can catalyze protein folding. ### Competing Interest Statement The authors have declared no competing interest. Pershing Square Foundation, https://ror.org/04tce9s05 G. Harold & Leila Y. Mathers Foundation National Institutes of Health, DP1GM123454, R35GM144046 Memorial Sloan Kettering Cancer Center, https://ror.org/02yrq0923, P30 CA008748
www.biorxiv.org
Reposted by Antonio Torres-Méndez
christophgiez.bsky.social
Just dropped a new preprint! 🧠✨ We did some exciting comparative connectomics and uncovered new insights into how neural circuits evolve. Check it out 👇 #neuroscience #connectomics #preprint #evolution
neuroluci.bsky.social
How do brain circuits evolve? We started looking for some answers by using synapse-resolution cross-species comparative connectomics on an entire olfactory circuit 👇

bit.ly/44aVm9E
Reposted by Antonio Torres-Méndez
neuroluci.bsky.social
How do brain circuits evolve? We started looking for some answers by using synapse-resolution cross-species comparative connectomics on an entire olfactory circuit 👇

bit.ly/44aVm9E
Reposted by Antonio Torres-Méndez
nvolpe.bsky.social
WASP OR MOTH!? 🐝🤯

One of the most incredible mimics in the world, this Tiger Moth (Orcynia calcarata) looks so much like a wasp I was almost nervous holding it! 😳

There are so many tiger moths mimicking wasps in the Amazon it’s crazy! 😯🌳
How amazing is nature! 💛🖤