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Genome Research @genomeresearch.bsky.social · 7d

The new issue of @genomeresearch.bsky.social is now live. Follow the link to new research on microglia in neurodegenerative diseases, intron retention in nuclear RNA complexes, and more! tinyurl.com/Genome-Res-3...

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Genome Research @genomeresearch.bsky.social · Sep 8

Deadline extended to November 1st!

Genome Research @genomeresearch.bsky.social · May 7

Call for Papers! @genomeresearch.bsky.social is now encouraging submissions for a Special Issue on The Genetics and Genomics of Somatic Mosaicism, Guest Edited by Drs. Gilad Evrony, Eunjung (Alice) Lee, and Raheleh Rahbari. tinyurl.com/Call-for-pap... #BOG25 #KSMosaicism25 #MITS25 #somaticmosaicism

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Genome Research @genomeresearch.bsky.social · May 7

Call for Papers! @genomeresearch.bsky.social is now encouraging submissions for a Special Issue on The Genetics and Genomics of Somatic Mosaicism, Guest Edited by Drs. Gilad Evrony, Eunjung (Alice) Lee, and Raheleh Rahbari. tinyurl.com/Call-for-pap... #BOG25 #KSMosaicism25 #MITS25 #somaticmosaicism

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Simone Andrea Biagini 🏳️‍🌈 @sabiagini.bsky.social · Sep 4

🚨 My new paper is out in the latest issue of @genomeresearch.bsky.social! 🧬

🧵 Check out my thread from yesterday for the details ⬇️

👨‍💻 Open source codes also available on my #GitHub page!

#AcademicSky

Simone Andrea Biagini 🏳️‍🌈 @sabiagini.bsky.social · Sep 3

🚨 Did you know that non-invasive prenatal screening (𝗡𝗜𝗣𝗦🤰) data can be repurposed for large-scale genomics? 🧬

Our new study shows how to turn low-coverage data into valuable insights, analyzing >32,000 genomes from Belgium. #genetics #imputation #NIPS #AcademicSky

genome.cshlp.org/content/35/9...

Genotype imputation from low-coverage data for medical and population genetic analyses

An international, peer-reviewed genome sciences journal featuring outstanding original research that offers novel insights into the biology of all organisms

genome.cshlp.org

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Genome Research @genomeresearch.bsky.social · Sep 2

The new issue of @genomeresearch.bsky.social is now live. Follow the link to new research on HER2 isoform diversity and drug resistance in breast cancer, off-target site detection in prime editing, and more! tinyurl.com/Genome-Res-3...

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Rob Patro @robp.bsky.social · Aug 21

🧬🖥️ Thrilled that our paper "Tree-based differential testing using inferential uncertainty for RNA-seq" genome.cshlp.org/content/earl..., led by @noorpratap.bsky.social, & in collab with @mikelove.bsky.social, @fennecpaaaw.bsky.social and Jason Fan is now accepted at @genomeresearch.bsky.social. 1/4

Tree-based differential testing using inferential uncertainty for RNA-seq

An international, peer-reviewed genome sciences journal featuring outstanding original research that offers novel insights into the biology of all organisms

genome.cshlp.org

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Stockholm University @stockholm-uni.bsky.social · Aug 20

By analyzing millions of messenger RNA molecules during the course of ALS, researchers have identified why certain nerve cells are resistant to the disease and what happens in the sensitive nerve cells when they are affected. New study in @genomeresearch.bsky.social #ALS
www.su.se/department-o...

New research shows how nerve cells can be protected against ALS - Department of Biochemistry and Biophysics

www.su.se

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CNAG @cnag-eu.bsky.social · Aug 11

🙌 New advances on rare diseases!
Within the Solve_RD, @pacbio.bsky.social HiFi long-read whole-genome sequencing has proven instrumental in uncovering previously undetectable genetic variants, leading to new diagnoses

genome.cshlp.org/content/35/4...
@genomeresearch.bsky.social @erdera.bsky.social

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Genome Research @genomeresearch.bsky.social · Aug 1

The new issue of @genomeresearch.bsky.social search is now live. Follow the link to new research on oxygen stress and gene regulation in the brain, a new C. elegans reference genome, and more! tinyurl.com/Genome-Res-3...

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Silvia Remeseiro Lab @remeseiro-lab.bsky.social · Aug 1

Now out @genomeresearch.bsky.social this fantastic work in collaboration with Claudio Cantù's lab.

About how #Wnt signalling activation induces #CTCF binding and formation of new #chromatin #loops at #CREs of target genes.

genome.cshlp.org/content/earl...

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Simone Andrea Biagini 🏳️‍🌈 @sabiagini.bsky.social · Jul 23

🚨 Excited to share my new paper! We imputed 32,769 ultra-low coverage genomes from #NIPS 🫃and show how our custom filtering (GDI) impacts ancestry and PGS analyses. Big thanks to the team behind this long and rewarding work! 🧬

📝 Now on @genomeresearch.bsky.social 👇

genome.cshlp.org/content/earl...

Genotype imputation from low-coverage data for medical and population genetic analyses

An international, peer-reviewed genome sciences journal featuring outstanding original research that offers novel insights into the biology of all organisms

genome.cshlp.org

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Marlies Oomen @marliesoomen.bsky.social · Jul 22

Very happy that this (last?) piece of my PhD time in the Dekker lab is now out in Genome Research! genome.cshlp.org/content/earl... @jobdekker.bsky.social @pablonavarrolab.bsky.social @genomeresearch.bsky.social

Mitotic chromosomes harbor cell type– and species-specific structural features within a universal loop array conformation

An international, peer-reviewed genome sciences journal featuring outstanding original research that offers novel insights into the biology of all organisms

genome.cshlp.org

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Claudio Cantù @claudiocantu81.bsky.social · Jul 15

A 6-year long study from the Lab is finally out @genomeresearch.bsky.social

Mastered by @annanordin.bsky.social in collaboration with Chaitali Chakraborty from @remeseiro-lab.bsky.social

Why is our work Important? Discover it in the quick Bluetorial 👇

genome.cshlp.org/content/earl...

Wnt signaling activation induces CTCF binding and loop formation at cis-regulatory elements of target genes

An international, peer-reviewed genome sciences journal featuring outstanding original research that offers novel insights into the biology of all organisms

genome.cshlp.org

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Cold Spring Harbor Laboratory Press @cshlpress.bsky.social · Jul 2

The new issue of @genomeresearch.bsky.social is now live. Follow the link to new research on single-cell multiomics of muscle response to endurance exercise, a method for Nanopore data compression, and more! tinyurl.com/Genome-Res-3...

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Genome Research @genomeresearch.bsky.social · Jul 1

The new issue of @genomeresearch.bsky.social is now live. Follow the link to new research on single-cell multiomics of muscle response to endurance exercise, a method for Nanopore data compression, and more! tinyurl.com/Genome-Res-3...

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Reposted by Genome Research

Tim @timisstuck.bsky.social · Jun 17

Making the rounds here on behalf of @lsajournal.org !
Great visit with my colleagues at @genesdev.bsky.social and @genomeresearch.bsky.social today to discuss our manuscript transfer procedures, towards better serving authors.

And admiring all the @cshlpress.bsky.social books 😍

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Ville Paakinaho @villepaakinaho.bsky.social · Jun 3

Happy to share that our latest research study is out now @genomeresearch.bsky.social

Androgen receptor-mediated assisted loading of the glucocorticoid receptor modulates transcriptional responses in prostate cancer cells

genome.cshlp.org/content/earl...

pubmed.ncbi.nlm.nih.gov/40456604/

Androgen receptor-mediated assisted loading of the glucocorticoid receptor modulates transcriptional responses in prostate cancer cells

An international, peer-reviewed genome sciences journal featuring outstanding original research that offers novel insights into the biology of all organisms

genome.cshlp.org

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Genome Research @genomeresearch.bsky.social · Jun 2

The new issue of @genomeresearch.bsky.social is now live. Follow the link to new research on TP53 regulation of transposable elements in cancer, gut microbiome–associated protists, and more! tinyurl.com/Genome-Res-3...

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The Tattooed Professor @schwessinger.bsky.social · Apr 14

Glad we found the perfect home in a community journal including a read and publish open access agreement. "Long-read genomics reveal extensive nuclear-specific evolution and allele-specific expression in a dikaryotic fungus" genome.cshlp.org/content/earl...

Long-read genomics reveal extensive nuclear-specific evolution and allele-specific expression in a dikaryotic fungus

An international, peer-reviewed genome sciences journal featuring outstanding original research that offers novel insights into the biology of all organisms

genome.cshlp.org

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Reposted by Genome Research

Stephanie Hicks @stephaniehicks.bsky.social · May 21

New paper out in @genomeresearch.bsky.social on using contrastive self-supervised learning for spatial domain detection with multi-omics data! Huge congratulations to Jianing Yao and coauthors Jinglun Yu, Brian Caffo Stephanie Page & @martinowk.bsky.social! 🧬 🖥️ 🧪

doi.org/10.1101/gr.2...

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Genome Research @genomeresearch.bsky.social · May 10

@atjcagan.bsky.social

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Genome Research @genomeresearch.bsky.social · May 10

Last night of another great #BOG25! Thanks to everyone who came to chat with us at our Meet the Editors sessions. Had a great year putting together this special double issue! Now, on to the next! #somaticmosaicism @genomeresearch.bsky.social @cshlmeetings.bsky.social

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Genome Research @genomeresearch.bsky.social · May 7

This Wednesday and Friday, meet the editors of @genomeresearch.bsky.social . We will be available to discuss your latest research and to answer any questions about the journal. In addition, hear about our upcoming issue on Somatic Mosaicism. #BOG25

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@lynnfellman.bsky.social @lynnfellman.bsky.social · May 7

Prof Dan Mishmar's latest paper is on the cover of CSHL’s “Genome Research” Journal — “Vertebrates show coordinated elevated expression of mitochondrial and nuclear genes after birth.” (My artwork on the cover). @genomeresearch.bsky.social @cshlmeetings.bsky.social

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Genome Research @genomeresearch.bsky.social · May 7

Call for Papers! @genomeresearch.bsky.social is now encouraging submissions for a Special Issue on The Genetics and Genomics of Somatic Mosaicism, Guest Edited by Drs. Gilad Evrony, Eunjung (Alice) Lee, and Raheleh Rahbari. tinyurl.com/Call-for-pap... #BOG25 #KSMosaicism25 #MITS25 #somaticmosaicism

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