Gerard Lab
@gerardlab.bsky.social
540 followers 540 following 10 posts
We love T cells, anti-tumour immunity and imaging! Lab at the Kennedy Institute of Rheumatology, University of Oxford.
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Reposted by Gerard Lab
labliston.bsky.social
For our #flowcytometry peeps, would you like to have a single fix/perm protocol that is optimised for everything? One that preserves fluorophores while allowing simultaneous TF and cytokine staining? How about 100-fold cheaper?

You got it:
currentprotocols.onlinelibrary.wiley.com/doi/10.1002/...
currentprotocols.onlinelibrary.wiley.com
Reposted by Gerard Lab
labwaggoner.bsky.social
Lung structural cells are altered by influenza virus leading to rapid immune protection following re-challenge @natcomms.nature.com www.nature.com/articles/s41...
Reposted by Gerard Lab
y-luo.bsky.social
📣First paper from the lab is out in @science.org‬! 📣https://www.science.org/doi/10.1126/sciadv.adu3461 It’s well known that HLA shapes the TCR repertoire — but how does this change under immune checkpoint blockade (ICB)?
Defining the genetic determinants of CD8+ T cell receptor repertoire in the context of immune checkpoint blockade
Immune checkpoint blockade influences the genetically determined relationship between TCR repertoire and HLA alleles in cancer.
www.science.org
Reposted by Gerard Lab
labliston.bsky.social
I'm excited about a new @biorxivpreprint.bsky.social story that just went live! This one takes a #computational #immunology approach to understanding #tissueresident lymphocytes. The story highlights the extra value mathematical modelling can bring to biology. 🧵1/10

www.biorxiv.org/content/10.1...
Probabilistic migration events drive transient tissue residency of lymphocytes during homeostasis
Tissue-resident lymphocytes form a phenotypically and functionally distinct analog to the corresponding circulatory lymphocyte populations. Residential CD8 T cells, in particular, are identified as having prolonged residence in the tissues and key functions in recall responses at tissue-environmental interfaces, although the dwell time in individual tissues has yet to be resolved. Residential CD4 T cells, regulatory T cells, B cells, and NK cells have been demonstrated to share phenotypic properties with residential CD8 T cells, but the migratory kinetics are even more poorly defined. Here we used probabilistic modelling on a large parabiosis dataset, covering multiple time-points and tissues, to calculate migration kinetics and dwell times of multiple lymphocyte subsets across a diverse set of tissues. Markov chain modelling identified distinct cell type-specific and tissue-specific residency patterns. The liver and gut were prone to prolonged residency compared to other tissue types, and a hierarchy of residency was observed with CD8 T cells and NK cells demonstrating longer residency than CD4 conventional T cells and regulatory T cells, which in turn resided in tissues longer than B cells. With few exceptions, however, average residency was at least an order of magnitude shorter than the life-span of the mouse, indicating a more dynamic form of steady-state tissue residency than usually assumed. Together these data provide a comprehensive model of a pan-tissue shared program in lymphocyte tissue residence, as well as identifying cell type- and organ-specific modification of the migratory kinetics. ### Competing Interest Statement The authors have declared no competing interest. Wellcome Trust, https://ror.org/029chgv08, 222442/Z/21/Z European Research Council, TissueTreg
www.biorxiv.org
Reposted by Gerard Lab
tcell.bsky.social
Our new review article led by Jordan Kramer:

Platforms for studying cell–cell recognition by immune cells

onlinelibrary.wiley.com/doi/10.1111/...
Reposted by Gerard Lab
victora.bsky.social
Dear uLIPSTIC users,

We have been getting reports that, under some more inflammatory settings like TB or chronic LCMV infection, uLIPSTIC-expressing lymphocytes adoptively transferred into cre-negative uLIPSTIC hosts may be rejected at later timepoints (>1 wk).
Reposted by Gerard Lab
timmunologist.bsky.social
There are still a few places left for this major @oxfordcancer.bsky.social fixture. We are keeping registration open until places are filled so sign up now!
oxfordcancer.bsky.social
Registration for the Oxford Cancer Immuno-Oncology Network (OCION) Annual Symposium 2025 closes midday 23rd May! Abstract deadline: 15th May.

Big thanks to this year's sponsors:
@10xgenomics.bsky.social
@Immunocore
@nanoporetech.com
@imtadvances.bsky.social
Oxford Cancer Immuno-Oncology Network (OCION) Annual Symposium 2025
The OCION Annual Symposium aims to help catalyse immuno-oncology research across Oxford
www.eventbrite.co.uk
Reposted by Gerard Lab
eileenparkes.bsky.social
Incoming - new preprint alert from the Parkes lab led by @brunobeernaert.bsky.social Full bluetutorial follows! 1/ 11 www.biorxiv.org/content/10.1...
Model figure - in EAC cancers, as chromosomal instability (CIN) increases, we found that a CIN-driven cGAS-dependent axis drives myeloid directed chemokine expression and recruitment of tumor-favoring myeloid populations
Reposted by Gerard Lab
Reposted by Gerard Lab
oxfordcancer.bsky.social
Last chance to apply for our 2025 DPhil in Cancer Science Programme!

🥼 We are open to applications from Medical Undergraduates

📚 We also have 3 GSK-Oxford DPhil studentships available.

📢 Deadline: Noon 25th April.

Apply below ⬇️ @medsci.ox.ac.uk

www.cancer.ox.ac.uk/study#how-to...
DPhil in Cancer Science
We use cookies to ensure that we give you the best experience on our website. If you click 'Accept all cookies' we'll assume that you are happy to receive all cookies and you won't see this message…
www.cancer.ox.ac.uk
Reposted by Gerard Lab
bendinglab.bsky.social
Now published @cp-iscience.bsky.social
Work lead by David Lecky & Lozan Sheriff in collaboration with @therad-lab.bsky.social and @cameron-wraith.bsky.social showing how IFNg augments T Cell receptor signal strength to enhance type 1 Regulatory T (Tr1) cell development

www.cell.com/iscience/ful...
Reposted by Gerard Lab
jelenalab.bsky.social
The loss of TBK1, or both TBK1 and the related kinase IKKε, results in uncontrolled cell death–driven inflammation. We show that TBK1/IKKε prevent premature cell death by limiting the activity of multiple death pathways in myeloid cells. www.science.org/doi/10.1126/...
TBK1 and IKKε prevent premature cell death by limiting the activity of both RIPK1 and NLRP3 death pathways
TBK1 and IKKe prevent premature cell death by limiting the activity of multiple death pathways in myeloid cells.
www.science.org
Reposted by Gerard Lab
maurogaya.bsky.social
🦠🔬 We are very excited to organize an EMBO workshop on Immunity in Barrier Tissues with Carolyn King! @immunologyking.bsky.social

📍 Where: Basel, Switzerland
📅 When: 26th–29th August 2025
📝 Registration deadline: 30th May 2025

Check out the program and details 🔗

#EMBOBarrierTissues @embo.org
Adaptive immunity in barrier tissues
Immune responses lie at the heart of almost every aspect of human health, including host responses to infection, autoimmunity, cancer, metabolism and aging. While adaptive immune responses by B and T…
meetings.embo.org
Reposted by Gerard Lab
franzeprogatzky.bsky.social
🚨 We have TWO exciting open positions in our lab! 🚨

We are looking for talented, highly motivated, and collaborative individuals to join our dynamic team as:

🔬 Research Assistant
www.kennedy.ox.ac.uk/jobs/researc...

💻 Bioinformatics Postdoc
www.kennedy.ox.ac.uk/jobs/bioinfo...

📢 Please share!
Research Assistant (177885)
We are looking for a Research Assistant with a background in immunology/neurobiology to join the interdisciplinary laboratory of Dr Fränze Progatzky at the Kennedy Institute.
www.kennedy.ox.ac.uk
Reposted by Gerard Lab
labwaggoner.bsky.social
Intravital imaging of pulmonary lymphatics in inflammation and metastatic cancer @jem.org @simoncleary.bsky.social
doi.org/10.1084/jem....
Reposted by Gerard Lab
labwaggoner.bsky.social
Meningeal regulatory T cells restrain local interferon-γ–producing lymphocytes, thereby safeguarding parenchymal brain homeostasis
@sciimmunology.bsky.social @mmr2.bsky.social
www.science.org/doi/10.1126/...
Reposted by Gerard Lab
gerardlab.bsky.social
The OT-I TCR is often criticised as being very high-affinity and displaying unusual behaviour compared to other TCR transgenics. New work from @tcell.bsky.social shows this might not be the case. Will I still use OT-I and all the wonderful tools associated with it? Yes I will!
tcell.bsky.social
Our new work!

The 3D affinities of the OT-I TCR to foreign and self-antigens predict their 2D affinities and reveal imperfect antigen discrimination

www.biorxiv.org/content/10.1...
Reposted by Gerard Lab
joshuabull.bsky.social
FYI for anyone interested in MuSpAn - we've updated the preprint this week with the full SI. Now featuring more examples of how various different spatial metrics can be strung together in order to make spatial pipelines focussed on specific biological questions!

www.biorxiv.org/content/10.1...
MuSpAn: A Toolbox for Multiscale Spatial Analysis
The generation of spatial data in biology has been transformed by multiplex imaging and spatial-omics technologies, such as single cell spatial transcriptomics. These approaches permit a detailed mapp...
www.biorxiv.org