Andrea Dallapè
@daddea.bsky.social
670 followers 440 following 54 posts
cryoEM enthusiast, cryoET enthusiast soon. Last months as Research Assistant in WilsonLab, University of Hamburg, SPA cryoEM & ribosomes. Love Heterogeneity Analysis and continuous movements. Water diviner, always!
Posts Media Videos Starter Packs
Reposted by Andrea Dallapè
Reposted by Andrea Dallapè
Reposted by Andrea Dallapè
meiercredo.bsky.social
Check out our new preprint on an integrated pipeline combining in situ #cryo-ET with MALDI #MSImaging for single-cell identification and classification from previously analysed EM-grids.
Link: www.biorxiv.org/content/10.1...
Reposted by Andrea Dallapè
jhschaef.bsky.social
Helical Reconstruction of Amyloids in cryoSPARC?
We present guidelines, limitations & future perspectives for processing amyloids in cryoSPARC @structurabio.bsky.social.
Great collaboration of the Kelly Lab and @landerlab.bsky.social #cryoEM #amyloid www.biorxiv.org/content/10.1...
Amyloid reconstructions from cryoSPARC
Reposted by Andrea Dallapè
edwardteng.bsky.social
Muyuan Chen has turned structural biology into an immersive experience with his new video game Meowtabolism, now available on Steam.
Try the demo here: store.steampowered.com/app/4045010/...
Give Muyuan feedback: steamcommunity.com/app/4045010
#ScienceGaming #StructuralBiology #CryoEM #STEMOutreach
Reposted by Andrea Dallapè
olibclarke.bsky.social
Initial attempt at replicating in relion (parameters in next post). This is for Aca2-RNA, using a 100k subset of the 2D-classified particles (no prior 3D cleanup).

A 1-class ab initio in relion, then local refinement in relion (1.8deg searches+blush) gives a nominally 3.3Å map; 3.5 Å w/out blush.
Reposted by Andrea Dallapè
cellarchlab.com
Time for a thread!🧵 How different is the molecular organization of thylakoids in “higher” plants🌱? To find out, we teamed up with @profmattjohnson.bsky.social to dive into spinach chloroplasts with #CryoET ❄️🔬. Curious? ..Read on!

#TeamTomo #PlantScience 🧪 🧶🧬 🌾
elifesciences.org/articles/105...
1/🧵
Reposted by Andrea Dallapè
schurlab.bsky.social
Huntingtin binds and bundles F-actin!
Thrilled to team up with the Humbert (Sorbonne Université) and Song (KAIST) labs on this discovery.
We had a blast doing cryo-ET on this unexpected complex — and now so many new questions lie ahead!
#TeamTomo #CryoET #HTT #actin

doi.org/10.1126/scia...
Reposted by Andrea Dallapè
shyamalm.bsky.social
Ever wondered how to position organelles in bacteria? Wonder no more!
Happy to have contributed to this fantastic story from @cellforganized.bsky.social' lab.

The avenues this opens in the synthetic biology space are enormous!

Movie: Carboxysomes positioned in E. coli!

Preprint: shorturl.at/D6xVg
Reposted by Andrea Dallapè
cellarchlab.com
A molecular-resolution look into the near-native architecture of the spinach chloroplast🌱. This one was a long time in the oven, but we're happy to finally share our "version of record". What long-standing debates did we settle? Check back for a short thread🧵 on Monday. #TeamTomo #PlantScience 🧪🧶🧬🔬🌾
elife.bsky.social
🌱 Using ‘compelling’ methods, including #CryoET, researchers mapped spinach thylakoid membranes at single-molecule precision, revealing how photosynthetic complexes are organised and settling long-standing debates on chloroplast architecture.
buff.ly/j3TSIkn
Reposted by Andrea Dallapè
biorxiv-cellbio.bsky.social
Structural dynamics of mitochondrial ATP synthase in Chlamydomonas reinhardtii revealed by in situ CryoET https://www.biorxiv.org/content/10.1101/2025.09.10.674987v1
daddea.bsky.social
Impressive! Congratulations!
olibclarke.bsky.social
Happy to share a new preprint from the Clarke & Vallese (@fravallese.bsky.social) labs reporting #cryoem structures of two RBC stomatin complexes – with AQP1 & UT-B - continuing the SPFH theme from our recent vault preprint! This was a fun one and has been cooking for a while - read on for more! ⬇️
Upper - cryo-EM reconstruction of stomatin AQP1 complex. Lower - reconstruction of stomatin-UT-B complex.
daddea.bsky.social
Wow, those membranes!
Reposted by Andrea Dallapè
sbgrid.bsky.social
New Title Alert: AITom- an open-source platform for AI driven cellular electron cryo-tomography analysis.

Learn more here: buff.ly/LLGhjvY

#SBGrid #SBGridSoftware #StructuralBiology
Research
Xu Lab of Computational Biology
buff.ly
Reposted by Andrea Dallapè
vasilgaisin.bsky.social
We found a new #ecological factor in #microbial mats: the #bacterial contractile injection system. Using #cryoET, #metagenomics, & quantitative #immunoTEM, we studied this feature directly in natural populations of bacterial #cells.
pilhoferlab.bsky.social
Check out 🧐 our new preprint 📜:
www.biorxiv.org/content/10.1...
Congrats🎉 to @vasilgaisin.bsky.social and Corina Hadjicharalambous, who studied contractile injection systems directly in hot spring♨️ bacterial mats🦠
#microsky #teamtomo #Chloroflexota
daddea.bsky.social
I knew Texas was big, but I didn’t know it encompasses 4 states
daddea.bsky.social
Lovely.
So many US states I never heard of before, I definitely have to study an US map much better
radamssmash.bsky.social
My goto is to ask LLMs how many states have R in their name. They always fail. GPT 5 included Indiana, Illinois, and Texas in its list. It then asked me if I wanted an alphabetical highlighted map. Sure, why not.
A shitty map created by ChatGPT5.  it purports to be US States with an R in their name, but it's wrong and dumb and worthless just like LLMs.
Reposted by Andrea Dallapè
brettcollins.bsky.social
Not my area at all, but how cool are these cryoEM structures of purely RNA-based assemblies!
www.nature.com/articles/s41...
High resolution CryoEM maps of RNA assemblies
Reposted by Andrea Dallapè
cryoempapers.bsky.social
Cryo-EM structures of Egl-BicD-RNA complexes reveal how diverse mRNAs are selected for subcellular localization www.biorxiv.org/content/10.1101/2025.08.02.668268v1 #cryoem
Reposted by Andrea Dallapè
jomaalab.bsky.social
Check out our new preprint on the discovery of a molecular switch in NAC that mediates nascent chain sorting on the ribosome and prevents mitochondrial protein mistargeting by SRP. A great collaboration with the Shan Lab @Caltech and the Qi Lab @UVA: www.biorxiv.org/content/10.1...
Reposted by Andrea Dallapè