#transcriptomic,
1️⃣0️⃣📖 Paper: Shahbaz et al., Cell Reports Medicine (2025)
“Integrated immune, hormonal, and transcriptomic profiling reveals sex-specific dysregulation in Long Covid patients with ME/CFS.”
www.cell.com/cell-reports...
Integrated immune, hormonal, and transcriptomic profiling reveals sex-specific dysregulation in long COVID patients with ME/CFS
Shahbaz et al. find that female long COVID patients with ME/CFS exhibit heightened inflammation, altered hematopoiesis, disrupted hormone levels, and neuroinflammatory gene signatures. In parallel, ou...
www.cell.com
November 8, 2025 at 11:47 AM
Nature research paper: Transcriptomic and spatial organization of telencephalic GABAergic neurons

go.nature.com/43fLcE5
Transcriptomic and spatial organization of telencephalic GABAergic neurons - Nature
Long-distance migration and dispersion is a common characteristic of nearly all classes of telencephalic GABAergic neurons, which diversify extensively after birth in the cortex and striatum, but show limited postnatal changes in the septum, preoptic area and pallidum.
go.nature.com
November 8, 2025 at 12:24 PM
Cell Reports Medicine: 'Integrated immune, hormonal, and transcriptomic profiling reveals sex-specific dysregulation in long COVID patients with ME/CFS'

www.cell.com/cell-reports...
Integrated immune, hormonal, and transcriptomic profiling reveals sex-specific dysregulation in long COVID patients with ME/CFS
Shahbaz et al. find that female long COVID patients with ME/CFS exhibit heightened inflammation, altered hematopoiesis, disrupted hormone levels, and neuroinflammatory gene signatures. In parallel, ou...
www.cell.com
November 7, 2025 at 10:33 PM
Proud to announce our paper ‘Transcriptomic Analysis of the Human Habenula in Schizophrenia’ from @lieberinstitute.bsky.social is the cover article for the November issue of the American Journal of Psychiatry! 🧠 #HabenulaLIBD #snRNAseq #Habenula doi.org/10.1176/appi...
Transcriptomic Analysis of the Human Habenula in Schizophrenia | American Journal of Psychiatry
Objective: The objective of this study was to define the molecular neuroanatomy of the human habenula (Hb) and identify transcriptomic differences between brains of individuals with schizophrenia and ...
doi.org
November 4, 2025 at 9:31 PM
2/
Press release:
www.ualberta.ca/en/folio/202...

Paper:
Integrated immune, hormonal, and transcriptomic profiling reveals sex-specific dysregulation in long COVID patients with ME/CFS

www.cell.com/cell-reports...

#LongCovid #cfs
November 7, 2025 at 6:31 PM
A spatial transcriptomic atlas of autism-associated genes identifies convergence in the developing human thalamus https://www.biorxiv.org/content/10.1101/2025.11.05.685843v1
November 6, 2025 at 11:16 PM
Single-cell resolution spatial transcriptomic signature of the retrosplenial cortex during memory consolidation
www.nature.com/articles/s41...
Single-cell resolution spatial transcriptomic signature of the retrosplenial cortex during memory consolidation - Molecular Psychiatry
Molecular Psychiatry - Single-cell resolution spatial transcriptomic signature of the retrosplenial cortex during memory consolidation
www.nature.com
November 4, 2025 at 5:49 PM
Integrative analysis of genomic and transcriptomic data informs precancer progression in the pancreas https://www.biorxiv.org/content/10.1101/2025.11.03.686234v1
November 4, 2025 at 3:48 PM
A plasma membrane receptor complex mediates early heat-responsive signaling to trigger nuclear transcriptomic reprogramming in Arabidopsis #research #MolecularPlant cell.com/molecular-pl...
November 1, 2025 at 11:53 AM
Comparative #transcriptomic analysis of #Chinese #cabbage’s defense responses to #Alternaria brassicae
🥬https://doi.org/10.1016/j.jia.2025.06.024
✏️Prof. Baohua Li team from Northwest A&F University
🔗Chinese tweet shorturl.at/cxQiC
#horticulture #plantsci
November 4, 2025 at 8:35 AM
Spatiotemporal transcriptomic and metabolomic landscapes of wild soybean seed development reveal regulatory mechanisms of nutrient accumulation #research #PlantCommunications cell.com/plant-commun...
November 1, 2025 at 11:51 AM
Integrated #transcriptomic and metabolomic analyses reveal a novel mechanism of resistance to #Colletotrichum fructicola in #pear
🍐https://doi.org/10.1016/j.jia.2024.12.041
#horticulture #plantsci
October 31, 2025 at 7:21 AM
COL8A1 #EndMT

Human aortic endothelial cells with immobilized, but not soluble, COL8A1 proteins▶️
Elongated morphology
⏫Endothelial/angiogenic transcriptomic features

TNFα-induced #EndMT ⏫by siCOL8A1, ⏬by lentiviral COL8A1

@jeffhsumd.bsky.social #AJPHC 2025
journals.physiology.org/doi/abs/10.1...
October 31, 2025 at 7:04 PM
CFMF: A Clustering-Free Cell Marker Finder for Single-Cell Transcriptomic Data https://www.biorxiv.org/content/10.1101/2025.10.26.683836v1
October 28, 2025 at 6:47 PM
omicML: An Integrative Bioinformatics and Machine Learning Framework for Transcriptomic Biomarker Identification https://www.biorxiv.org/content/10.1101/2025.10.25.684517v1
October 28, 2025 at 3:47 AM
🚀 Our new Science paper is out (w/ B DeMeo, D Burkhardt, A Shalek, M Cortes): www.science.org/doi/10.1126/...
We show that active learning + transcriptomic perturbations can guide which exps to run next, boosting phenotypic hit rates >13x. AI not just predicting bio, but designing it. 🔁
October 25, 2025 at 1:24 PM
🚨 New paper out in #JCP-A @springernature.com "Divergent sensory transcriptomic profiles in positive and negative learning in Bicyclus Anynana butterflies" by Yi Teng Ter & Erica Westerman #Neurogenomics #VisualLearning #Lepidoptera 🧪🧠🦋
↘️ link.springer.com/article/10.1... ↙️
Divergent sensory transcriptomic profiles in positive and negative learning in Bicyclus Anynana butterflies - Journal of Comparative Physiology A
Journal of Comparative Physiology A - Mate preference learning, where individuals learn to prefer or avoid specific phenotypes during mate selection, is pervasive across animal taxa and influences...
link.springer.com
October 23, 2025 at 12:06 AM
🔬🌹 RESEARCH 🌹🔬

Transcriptomic and functional analyses reveal a molecular framework of Botrytis cinerea colonization in rose, which integrates multiple fungal physiological processes and manipulation of plant cells - Li et al.

🔗 doi.org/10.1093/jxb/...

#PlantScience 🧪
October 23, 2025 at 1:11 PM
There's something else we want to highlight about this paper: all the single-cell transcriptomic atlases can be freely browsed through an interactive database (by @aelek.bsky.social). This includes 3 coral species: Oculina, Stylophora pistillata & Acropora millepora 🪸

sebelab.crg.eu/multicoral-s...
October 20, 2025 at 5:16 PM
Transcriptomic Profiling of Bronchial Epithelium Reveals Dysregulated Interferon and Inflammatory Responses to Rhinovirus in Exacerbation-Prone Pediatric Asthma https://www.biorxiv.org/content/10.1101/2025.10.19.683298v1
October 20, 2025 at 3:30 AM
This is not generative AI, this is actually machine learning. The trainee's head is highly specialized and focused in a specific area of knowledge.

transcriptomic data, biological text, and metadata

And again, even with this, they do not think, they cannot provide intelligence.
October 17, 2025 at 5:20 PM
'This system provides us with a manipulable model that allows for controlled cytokine exposures of multiple timescales and concentrations, with both transcriptomic and glycomic readouts'
#immunology #preprint #glycobiology
www.biorxiv.org/content/10.1...
Multivariate analysis of glycogenes reveals coordinated regulation of immunoglobulin glycosylation in an immortalized human B cell system
While neutralizing ability has traditionally been considered the most important antibody function, appreciation has grown for Fc-mediated ‘extra-neutralizing’ functions, which are shaped by IgG glycos...
www.biorxiv.org
October 17, 2025 at 11:14 AM
(2/5)
In our latest work, we established persistent viral infections to examine their impact on this model organism.
We followed survival and other life history traits, and we also performed a transcriptomic analysis over time… (The data is available for you to play with it! 💻🧬🪰)
October 17, 2025 at 2:07 PM