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Dan MacLean

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H-index: 43
Biology 51%
Agriculture 37%
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Reposted by: Dan MacLean

biorxiv-molbio.bsky.social
Synchronous spatio-temporal control of autophagy and organelle trafficking is necessary for appressorium-mediated plant infection by Magnaporthe oryzae https://www.biorxiv.org/content/10.1101/2025.10.06.680644v1
1

by Dan MacLean

danmaclean.bsky.social
2️⃣ For the love of all that remains sane in the world.
1

Reposted by: Dan MacLean

benmckenna.bsky.social
Great to hear Burnham's been to Mancwalk 2000.
Walk like a Manc classes
8 22

Reposted by: Dan MacLean

christiannolan.bsky.social
Normalize never saying "leverage" or "utilize" as a verb. Tempted? "Use" is right there!

Simple words are better words
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Reposted by: Dan MacLean, Dorothy Bishop

clairecopperman.bsky.social
"It has never been clearer: this is a class war, mediated through one person."
Love this article from @zoesqwilliams.bsky.social. I snorted several times, but she makes some serious points: in the eyes of the tabloids, the working class Rayner can't win, whatever she does.
Why are the tabloids so enraged about every aspect of Angela Rayner’s life? | Zoe Williams
Whether it’s her housing, clothes, the restaurants she goes to, or the fact she watches opera and drinks wine, she can apparently do nothing right, writes Guardian columnist Zoe Williams
www.theguardian.com
1 9 20

by Dan MacLean

danmaclean.bsky.social
$ ls -laht
drwxrwsr-x 3 uname grp 27 Nov 16 2006 .nautilus
drwxrws--- 3 uname grp 26 Nov 16 2006 .metacity
-rwxrwx--- 1 uname grp 26 Nov 16 2006 .dmrc

😐

Reposted by: Dan MacLean

gigascience.bsky.social
Chris outlining the different AI coding agents that can be used for ontology development. Working on documenting best practices for this ai4curation.GitHub.io/aidocs #BOSC2025 #ISMBECCB2025
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Reposted by: Dan MacLean

gigascience.bsky.social
Today #BOSC2025 and #BOKR (formerly Bioontologies) COSI’s, Chris Mungall is doing the keynote on Open KBs in the age of generative AI #ISMBECCB2025
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Reposted by: Dan MacLean

darakhshann.bsky.social
*Learning visualization in Python as an R user*
#ggplot
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Reposted by: Dan MacLean

fesshole.bsky.social
I work with a lot of very intelligent people - the experts in a very select field - yet every morning they fight over the parking spots in the shade. By lunchtime they're all in full sun and my unwanted "sunny" spot keeps my car nice and cool. They never learn.
13 12 420

by Dan MacLean

danmaclean.bsky.social
open.substack.com/pub/clauswil...
No, AlphaFold has not completely solved protein folding
Biology is hard. Yes, even for AI.
open.substack.com

Reposted by: Dan MacLean

mikelove.bsky.social
I recently ran a session at CSAMA with Laurent Gatto and this is the way. "Good enough" with knowledge of the tools that can help you get there. Here's some of the recs from the paper.
Recs from the linked paper
1 9 38

Reposted by: Dan MacLean, Simon Roux

clauswilke.com
AlphaFold is great, but contrary to public opinion it has not completely solved the protein folding problem. Much work remains to be done.
clauswilke.substack.com/p/no-alphafo...
No, AlphaFold has not completely solved protein folding
Biology is hard. Yes, even for AI.
clauswilke.substack.com
3 67 130

by Dan MacLean

danmaclean.bsky.social
😀 This is good to hear. My kid is past kpop phase so won't choose it, but I put it on my mental watchlist as a candidate for one of those nothing else on, dad can still choose some good things, type evenings.
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by Dan MacLean

danmaclean.bsky.social
Nice. An API is like a structured set of URLs for querying data that you can send to someone's computer and they'll send you an appropriate response. Eg api.mcdonalds.com/menu/sold/cheeseburger might return 31234543219494938263628 (some big number, anyway)
Api.mcdonalds.com
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by Elizabeth Saunders — Reposted by: Dan MacLean, John L. Provis, Benny Geys , and 5 more

officialmelbrooks.bsky.social
I told you we’d be back
1.6K 13K 43K

by Dan MacLean

danmaclean.bsky.social
If it was a small sample I might try Internet archives set of scanned magazines, iirc they have ads scanned or you might find it in reviews archive.org/details/comp...
Internet Archive: Digital Library of Free & Borrowable Texts, Movies, Music & Wayback Machine
archive.org
2

by Dan MacLean

danmaclean.bsky.social
I use this yihui.org/tinytex/ (mostly through quarto so ymmv) but it's ok for that.
TinyTeX - Yihui Xie | 谢益辉
TinyTeX is a custom LaTeX distribution based on TeX Live that is small in size, but functions well in most cases, especially for R users. If you run into the problem of missing LaTeX packages, it &hel...
yihui.org

Reposted by: Dan MacLean

dasharez0ne.bsky.social
"AI" - dashare.zone ADMIN
A SKLEATON RISIN UP OUT OF DA GRAVE 2 REMIND YOU THAT DA A.I SHIT THATS GOING AROUND NOW IS DA SAME AS EVERY OTHER COMPUTER SCAM , AND THE BEST ITS GOT AFTER TRILLION'S OF DOLLARS OF MONEY AND SO MANY COMPUTERS THAT WE HAD TO OPEN NEW POWER PLANTS TO RUN THEM , IS : 1. VIDEO'S OF PEOPLE WHO ARE MOVING AROUND SLOWLY IN A WEIRD WAY, 2. PHOTO'S OF JESUS WHERE HES IN A SHOPPING MALL WITH THE PRESEDENT, 3. CODE THAT DOSENT WORK, 4. INCORRECT SUMMARY OF INFOMATION THAT YOU PASTE INTO IT, 5. NOW DUMB GUYS THINK THAT THE COMPUTER IS SAD OR SMART!!! THERE ALL BAD BUT THE WORST PART IS THAT THE WORST GUYS IN THE WORLD ARE MAKEN A SHIT LOAD OF MONEY OFF OFF IT AND IT DOESNT EVEN WORK, ANYWAY THE TEXT SAYS " REMEMEBER NFT'S? SORT OF? NOT REALLY? THE SAME GUYS WHO MADE THAT BULLSHIT ARE NOW TELLIN US AUTO COMPLETE IS INTELEGENT AND IT HAS FEELINGS" - DASHARE.ZONE ADMIN
1.4K 3.7K

by Dan MacLean

danmaclean.bsky.social
Afternoon stroll
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by Dan MacLean

danmaclean.bsky.social
I would say don't. Take the opportunity to start per project libraries with renv.

Reposted by: Dan MacLean

whalepetunias.bsky.social
"Time is an illusion. Lunchtime doubly so."
5 11

Reposted by: Dan MacLean

eddelbuettel.com
#Rstats is being rewritten in Rust, and the R Core already has a book coming out!
O'RLY book title 'Rewriting R in Rust' with a subtitle 'How Hard Can It Be?' and a 'A Compelling Weekend Project' header written by the R Core Team
10 10 67

by Dan MacLean

danmaclean.bsky.social
Definitely a chopper
3

Reposted by: Dan MacLean

whalepetunias.bsky.social
The frightening thing about the Vogons was their absolute mindless determination to do whatever mindless thing it was they were determined to do. There was never any point in trying to appeal to their reason because they didn't have any.
11 14

by Dan MacLean

danmaclean.bsky.social
I get lots out of it, I think it's because I more easily see the bigger picture/broad strokes of what I'm trying to do and giving it that and having it fill in details is a real time/boredom saver.
3

Reposted by: Dan MacLean

odedrechavi.bsky.social
"A GO term analysis? how is this helpful?"
2 15 100

Reposted by: Dan MacLean

lonnibesancon.bsky.social
Plenty of tortured phrases (arxiv.org/abs/2107.0...) in this #IEEE paper. ieeexplore.ieee.org/...

My pubpeer report: pubpeer.com/publicat...
3 6

by Dan MacLean

danmaclean.bsky.social
Basically the subtitle of a talk I'm trying to write right now!
1

Reposted by: Dan MacLean

whalepetunias.bsky.social
"They would appear," said Ford doubtfully, "to have turned into a bowl of petunias and a very surprised looking whale..."
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References

Fields & subjects

Updated 1m