Craig M. Crews
craigmcrews.bsky.social
Craig M. Crews
@craigmcrews.bsky.social
Pinned
It's an honor to share this year's Passano Award with Ray Deshaies, Ph.D. for the development of PROTACs, a new therapeutic modality that targets proteins for degradation via co-opting the cellular protein recycling machinery.
Reposted by Craig M. Crews
Nature research paper: ZAK activation at the collided ribosome

go.nature.com/4a9cika
ZAK activation at the collided ribosome - Nature
The kinase ZAK is activated at collided ribosomes to mediate the ribotoxic stress response.
go.nature.com
November 25, 2025 at 10:56 AM
Reposted by Craig M. Crews
popEVE is out in Nature Genetics! 🎉
We built a proteome-wide model that combines cross-species and human population variation to rank missense variants by disease severity and help diagnose rare genetic disorders.
rdcu.be/eRu7K
Proteome-wide model for human disease genetics
Nature Genetics - popEVE is a proteome-wide deep generative model to identify and predict pathogenicity of missense mutations causing genetic disorders.
rdcu.be
November 24, 2025 at 1:35 PM
Reposted by Craig M. Crews
The second part of our (with @origichals.bsky.social and El Hadji) two-part review on non-covalent SUMO interactions is now published, focussing on SUMO-interacting motifs (SIMs), but discussing also other confirmed or potential SUMO-interacting elements.
Non-covalent SUMO interactions with ligases and effectors: SUMO-interacting motifs and beyond
SUMOylation, a protein post-translational modification (PTM) involving the covalent attachment of small ubiquitin-like modifier (SUMO), regulates a wide range of cellular processes. The key hallmark o...
portlandpress.com
November 24, 2025 at 9:06 PM
Reposted by Craig M. Crews
How circular extrachromosomal DNA is inherited during cell division has been a puzzle

go.nature.com/441YKU7
Circular DNA has a ticket to ride chromosomes
Nature - How circular extrachromosomal DNA is inherited during cell division is a puzzle. Key sequences enabling this DNA to journey with chromosomes have been identified.
go.nature.com
November 24, 2025 at 9:38 AM
Reposted by Craig M. Crews
AlphaFold Protein Structure Database 2025: a redesigned interface and updated structural coverage academic.oup.com/nar...

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#proteomics #prot-paper
November 24, 2025 at 10:20 AM
Reposted by Craig M. Crews
Thrilled to share that the final piece of my PhD work is now on bioRxiv! biorxiv.org/content/10.1... With support from @nvidia and the @NSF, we used AlphaFold to screen 1.6M+ protein pairs, revealing thousands of potential novel PPIs. All data can be viewed at predictomes.org/hp
Proteome-wide in silico screening for human protein-protein interactions
Protein-protein interactions (PPIs) drive virtually all biological processes, yet most PPIs have not been identified and even more remain structurally unresolved. We developed a two-step computational...
biorxiv.org
November 12, 2025 at 9:26 PM
Reposted by Craig M. Crews
How does messenger RNA (mRNA) get out of the nucleus to become a protein? Eukaryotic mRNA is packaged, exported, and then translated in the cytoplasm. But how do these steps work? And what are open questions? Check out our new review for our take: www.annualreviews.org/content/jour... (1/3)
November 21, 2025 at 5:37 PM
Reposted by Craig M. Crews
I tried the updated Gemini image generator on scientific related image prompts that have failed in the past and I am really impressed by the quality of the outputs. The first is drawing a diagram for a pocket prediction algorithm using Voronoi diagram, Delaunay triangulation and alpha shapes
November 21, 2025 at 1:14 PM
Reposted by Craig M. Crews
Delayed weekly selection of articles on #proteostasis thanks to @biomednews.bsky.social -- biomed.news/bims-proteo/...
Highlight - Pooled overexpression screening identifies PIPPI as a novel microprotein involved in the ER stress response academic.oup.com/nar/article/...
bims-proteo 2025-11-16 papers
biomed.news
November 21, 2025 at 7:46 PM
Reposted by Craig M. Crews
Some animations I recently created for profluent.bio. As a structural biologist, I’m genuinely fascinated by their work in generative protein design. Congratulations to the team on their new round of funding!
#molecularnodes
November 21, 2025 at 1:02 PM
Reposted by Craig M. Crews
Lots of potential for future ciliary (and non-ciliary) screening applications. Great work by all authors, especially postdoc Jingbo Sun. And great collaboration with the Khokha lab!
November 20, 2025 at 5:06 PM
Reposted by Craig M. Crews
The President of the United States just called for Democratic members of Congress to be executed. "HANG THEM", he posted.

If you're a person of influence in this country and you haven't picked a side, maybe now would be the time to pick a fucking side.
November 20, 2025 at 4:15 PM
Reposted by Craig M. Crews
Curing autoimmune diabetes in mice with islet and hematopoietic cell transplantation after CD117 antibody-based conditioning @jci.org
www.jci.org/articles/vie...
November 20, 2025 at 5:52 PM
Reposted by Craig M. Crews
Elucidating pathway-selective biased CCKBR agonism for Alzheimer’s disease treatment: Cell www.cell.com/cell/fulltex...
Elucidating pathway-selective biased CCKBR agonism for Alzheimer’s disease treatment
Clinical evidence from AD patients reveals an association between impaired CCKBR-Gq signaling and disease severity, guiding structure-based design of a Gq-biased agonist that rescues memory and pathol...
www.cell.com
November 20, 2025 at 6:01 PM
Reposted by Craig M. Crews
Pancreatic cancer cells express cryptic peptides shared across patients that may be therapeutic targets, according to research from earlier this year in Science.

Learn more in this #SciencePerspective on #WorldPancreaticCancerDay: https://scim.ag/4o0MslR
The hunt for common tumor antigens
Pancreatic cancer cells express cryptic peptides shared across patients that may be therapeutic targets
scim.ag
November 20, 2025 at 4:53 PM
Reposted by Craig M. Crews
Annndddd it’s out! Here’s what came out of combining my virology background with the @brozlab.bsky.social’s cell death focus : a novel role for the cell death protein ninj1 during hsv1 infection. In brief, Ninj1 on mouse macrophages results in lower infection rates and higher cytokine secretion.
November 20, 2025 at 3:29 PM
Chemical biology 2026 www.embl.org/about/info/c...
Chemical biology 2026
www.embl.org
November 20, 2025 at 12:29 PM
Reposted by Craig M. Crews
For readers interested in therapeutic strategies based on inducing proximity between proteins, such as Halda's RIPTACs, here's a review on the field www.nature.com/articles/s41...
rdcu.be/eQzXF

and a news story on RIPTACs www.nature.com/articles/d41...
Induced proximity-based therapeutic modalities - Nature Reviews Drug Discovery
Induced proximity modalities encompass monovalent and bifunctional agents, such as molecular glues and proteolysis-targeting chimeras, that induce an interaction between biomolecules to functionally m...
www.nature.com
November 18, 2025 at 3:25 PM
Reposted by Craig M. Crews
New preprint! We measured temperature- and pH-induced aggregation for over 18,000 natural and de novo designed protein domains!
November 19, 2025 at 9:16 PM
Reposted by Craig M. Crews
BRAIN-MAGNET: A functional genomics atlas for interpretation of non-coding variants @cellcellpress.bsky.social
www.cell.com/cell/fulltex... @ruizhideng.bsky.social
November 20, 2025 at 3:39 AM
Reposted by Craig M. Crews
Selective modRNA Translation System (SMRTS), a versatile, engineered mRNA system that enables targeted gene expression in specific cell populations
@moltherapy.bsky.social
www.cell.com/molecular-th...
November 20, 2025 at 4:16 AM
Reposted by Craig M. Crews
They also compared their identified ligand binding sites to those predicted by Boltz-2. They find that Boltz-2 predicts orthosteric binding well, but tends to also localize non-orthosteric binders to the orthosteric binding site. (2/2)
#ChemSky #ChemBio #ChemicalProteomics #ChemPro #ProteoProbes
November 20, 2025 at 5:29 AM
Reposted by Craig M. Crews
Check out our newest work! This is a story on how to get selectivity in binders - both isoform and site selectivity. Read the paper or enjoy this brief Skytorial of what we did!

www.biorxiv.org/content/10.1...

1/n
PANCS-spec-Binders: A system for rapidly discovering isoform- or epitope-specific binders
Proteins that bind to a target protein of interest, termed "binders," are essential components of biological research reagents and therapeutics. Target proteins present multiple binding surfaces with ...
www.biorxiv.org
November 19, 2025 at 6:10 PM